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Library Carpentry 2018-12-12/2018-12-13 @ ZB MED

Teilnehmende

  • Ursula Arning (uarning)
  • Silke Gotthardt (silkego)
  • Michael Mang (michaelmang1)
  • Konstanze Sigel (KonstanzeSigel)
  • Marvin Lanczek
  • Deborah Danowski (DeboDee)
  • Lydia Matthießen (matthiessen)
  • Hannelore Fries-Küpper (fries-kuepper)
  • Gabriele Wollnik-Korn (GabrieleWo)
  • Solveig Müller (Sunflower1979)
  • Eva Hackenberg (hackenbergxyz)
  • Beatrix Adam (SelmaCow)
  • Konrad Förstner (konrad)

Shell

Daten: https://raw.githubusercontent.com/librarycarpentry/lc-shell/gh-pages/data/shell-lesson.zip

Cheat Sheet: https://librarycarpentry.github.io/lc-shell/reference

Python

https://www.python.org/dev/peps/pep-0008/

Exampes DOIs:

  • 10.1371/journal.pcbi.1004668

dois = ["10.1371/journal.pcbi.1004668", "10.21105/joss.01035", "10.1038/35057062", "10.21105/joss.01006"]

Lessons

https://librarycarpentry.org/lc-shell/
https://librarycarpentry.org/lc-git/
https://librarycarpentry.org/lc-python-intro/

How to run python

In Git Bash

$ winpty  /c/Users/SWCarpentry/Anaconda3/python.exe

https://automatetheboringstuff.com/

What to do after the LC-workshop

  • Install Git Bash and Anaconda or you machine (ask the IT-department)
  • Find a good text editor (the next hacky-hour on the 20th at 14:00 will be based on that)
    1. emacs
    2. vim
    3. spider
    4. atom
    5. pycharm community edition
  • Go through the lessons and try to reproduce them alone
  • Find small tasks you solve on a daily bases and try to solve them using the computation skills you have learned
  • Participate to the hacky-hour regularly (if you can) and bring your own problems
  • Ask around if you have problems (if we can we are always open to help)
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