How to use ORCHIDEE with libIGCM? (2023/02/20)(Yi-Ying Chen, RCEC) How to use ORCHIDEE in off-line mode with IPSL LibIGCM (2023/02/13)(Yi-Ying Chen, RCEC)
Create a new task by Steps Step1: create a folder Create a folder under the path: /config/ORCHIDEE_OL
可用
cp /home/u9197633/MODEL_IPSL/ORC_4262_copy/config/ORCHIDEE_OL/TEST_RUN_TW_PFT /home/u2936446/MODEL_IPSL/ORC_4262/config/ORCHIDEE_OL/TEST_RUN_TW_PFT -r
Step2: vim config.card
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set up JobName
check CalendarType
set up DateBegin and DateEnd
check PeriodLength
set up the output file path(自己主機名稱)
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The image file may be corrupted The server hosting the image is unavailable The image path is incorrect The image format is not supported
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The image file may be corrupted The server hosting the image is unavailable The image path is incorrect The image format is not supported
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set up Restarts
set up WriteFrequency
Step3 : Modify the path of Boundary Files
Set up boundary file paths in COMP folder
We need edit orchidee_ol.card, sechiba.card, and stomate.card
Step4: Edit the bash script, clean.sh ( ref )
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Step5: Submit the ORCHIDEE job with libIGCM
Enter ./clean.sh to create the Job_JobName file as follow as:
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Step6: Check run.card
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All of the information are in the “run.card” file, so we usually type cat run.card
to check the job state.
Set up output variables Choose the variable levels in a new tasks
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To find the run.def in a new task.
Path: {New Task Folder}/ PARAM/ run.def
Set up levels of variables
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The image file may be corrupted The server hosting the image is unavailable The image path is incorrect The image format is not supported
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Assign CPU resources Edit AA_job file
Path: /ORC_4262/libIGCM/AA_job
#SBATCH --job_name=::Jobname:: (a dynamic variable for job name)
#SBATCH --ntasks = ::JobNumProcTot:: (a dynamic variable for number of cores, CPU)
#SBATCH –account=MST111248 (project name for accounting CPU resources)
#SBATCH -p ct56 (queue_name depend on the available queue in the system )
#SBATCH -o output script for your job
qstat
可看CPU狀態
ferret layout
ferret
use pic1
set view left
shade height[K=2, L=1]
use pic2
set view right
shade height[K=2, L=1]
frame /files=test2.gif
q
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The image file may be corrupted The server hosting the image is unavailable The image path is incorrect The image format is not supported
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