changed 7 years ago  
Linked with GitHub

Eᔕᖇs ᗯIᑎTEᖇ ᗯOᖇKᔕᕼOᑭ ☔

𝔻𝕒𝕪 𝟙 (𝟘𝟚.𝟙𝟚.𝟚𝟘𝟙𝟠) - 𝔻𝕒𝕪 𝟚 (𝟘𝟛.𝟙𝟚.𝟚𝟘𝟙𝟠)
𝕋𝕖𝕒𝕔𝕙𝕖𝕣: Michael Eitel
Dept. of Earth and Environmental Sciences
Ludwig-Maximilians-Universität München

Topics in Next Generation Sequencing Analysis

  • Getting data from NCBI

  • Raw reads quality control

  • Read processing

  • Post-processing read quality control

  • More short read statistic

  • Long read (pacbio) & hybrid (llumina, pacbio) assemblies

  • ontig merging and scaffolding (with nanopore reads)

  • Assembly evaluations (QUAST, BUSCO3)

Select a repo