JSON Pardini - HackMD

--- title: JSON Pardini tags: enacom, Dicom, JSON, Brain, Pardini description: Alinhamentos para JSON format --- # Alignment for JSON # Actual state (what we have) ```typescript { "base_input_dir": "path/to/base/dir", # Will point to all series "series_dir": "VOLUME_PM", "output_dir": "path/to/output/dir", # Will point to our masks "patient": { "sex": "M", "age": "063Y" }, "series": { "VOLUME_PM": { "0": { "assymetry": { "mse": 0, "ssim": 0, "dirsub": 0, "abssub": 0, "chi": 0 }, "labeler": [{ "segmentation": [[[0, 0], [0, 0]]], "mask_filename": "mask_0_0.png", "class": true, "subclass": "", "bbox": [0, 0, 0, 0], "area": 0, "iscrowd": true }, { "segmentation": [[[0, 0], [0, 0]]], "mask_filename": "mask_0_1.png", "class": true, "subclass": "", "bbox": [0, 0, 0, 0], "area": 0, "iscrowd": true }], "unet": { "segmentation": [[[0, 0], [0, 0]]], "class": true }, "raw": [{ "segmentation": [[[0, 0], [0, 0]]], "class": "a", "subclass" : "", "iscrowd": true, "image_id": "", "bbox": [0, 0, 0, 0], "image_filename" : "0.jpeg", "mask_filename": "mask_0_0.png", "area": 0 }, { "segmentation": [[[0, 0], [0, 0]]], "class": "", "subclass" : "", "iscrowd": true, "image_id": "", "bbox": [0, 0, 0, 0], "image_filename" : "0.jpeg", "mask_filename": "mask_0_1.png", "area": 0 }] }, "1": { "assymetry": { "mse": 0, "ssim": 0, "dirsub": 0, "abssub": 0, "chi": 0 }, "labeler": [{ "segmentation": [[[0, 0], [0, 0]]], "mask_filename": "mask_1_0.png", "class": true, "subclass": "", "bbox": [0, 0, 0, 0], "area": 0, "iscrowd": true }, { "segmentation": [[[0, 0], [0, 0]]], "mask_filename": "mask_1_1.png", "class": true, "subclass": "", "bbox": [0, 0, 0, 0], "area": 0, "iscrowd": true }], "unet": { "segmentation": [[[0, 0], [0, 0]]], "class": true }, "raw": [{ "segmentation": [[[0, 0], [0, 0]]], "class": "a", "subclass" : "", "iscrowd": true, "image_id": "", "bbox": [0, 0, 0, 0], "image_filename" : "0.jpeg", "mask_filename": "mask_1_0.png", "area": 0 }, { "segmentation": [[[0, 0], [0, 0]]], "class": "", "subclass" : "", "iscrowd": true, "image_id": "", "bbox": [0, 0, 0, 0], "image_filename" : "0.jpeg", "mask_filename": "mask_1_1.png", "area": 0 }] }}, "series1": { "0": { "assymetry": { "mse": 0, "ssim": 0, "dirsub": 0, "abssub": 0, "chi": 0 }, "labeler": [{ "segmentation": [[[0, 0], [0, 0]]], "mask_filename": "mask_0_0.png", "class": true, "subclass": "", "bbox": [0, 0, 0, 0], "area": 0, "iscrowd": true }, { "segmentation": [[[0, 0], [0, 0]]], "mask_filename": "mask_0_111.png", "class": true, "subclass": "", "bbox": [0, 0, 0, 0], "area": 0, "iscrowd": true }], "unet": { "segmentation": [[[0, 0], [0, 0]]], "class": true }, "raw": [{ "segmentation": [[[0, 0], [0, 0]]], "class": "a", "subclass" : "", "iscrowd": true, "image_id": "", "bbox": [0, 0, 0, 0], "image_filename" : "0.jpeg", "mask_filename": "mask_0_0.png", "area": 0 }, { "segmentation": [[[0, 0], [0, 0]]], "class": "", "subclass" : "", "iscrowd": true, "image_id": "", "bbox": [0, 0, 0, 0], "image_filename" : "0.jpeg", "mask_filename": "mask_0_1.png", "area": 0 }] }, "1": { "assymetry": { "mse": 0, "ssim": 0, "dirsub": 0, "abssub": 0, "chi": 0 }, "labeler": [{ "segmentation": [[[0, 0], [0, 0]]], "mask_filename": "mask_1_0.png", "class": true, "subclass": "", "bbox": [0, 0, 0, 0], "area": 0, "iscrowd": true }, { "segmentation": [[[0, 0], [0, 0]]], "mask_filename": "mask_1_1.png", "class": true, "subclass": "", "bbox": [0, 0, 0, 0], "area": 0, "iscrowd": true }], "unet": { "segmentation": [[[0, 0], [0, 0]]], "class": true }, "raw": [{ "segmentation": [[[0, 0], [0, 0]]], "class": "a", "subclass" : "", "iscrowd": true, "image_id": "", "bbox": [0, 0, 0, 0], "image_filename" : "0.jpeg", "mask_filename": "mask_1_0.png", "area": 0 }, { "segmentation": [[[0, 0], [0, 0]]], "class": "", "subclass" : "", "iscrowd": true, "image_id": "", "bbox": [0, 0, 0, 0], "image_filename" : "0.jpeg", "mask_filename": "mask_1_1.png", "area": 0 }] } } } } } ``` # Initialization Robert Will generate the whole JSON format as below ```typescript ``` # Write keys ## Mateus (segmentator + labeler) Mateus is in charge to fill this values (as well as append then to JSON[1] whenever there is a new slice) ```typescript ``` ## Gabriel (symmetry) Gabriel's symmetry will be in charge to fill this values (as well as append then to JSON[1] whenever the slice studied is not in JSON yet) ```typescript ``` ## Gustavo Maia (UNET) ```typescript ```

Syntax	Example	Reference
# Header	Header	基本排版
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