Lin Yi-Jie
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    # 2017q3 Homework1 (phonebook) contributed by <`LinRiver`> ## 實驗環境架設 ``` $ lscpu Architecture: x86_64 CPU op-mode(s): 32-bit, 64-bit Byte Order: Little Endian CPU(s): 4 On-line CPU(s) list: 0-3 Thread(s) per core: 2 Core(s) per socket: 2 Socket(s): 1 NUMA node(s): 1 Vendor ID: GenuineIntel CPU family: 6 Model: 78 Model name: Intel(R) Core(TM) i7-6500U CPU @ 2.50GHz Stepping: 3 CPU MHz: 1247.949 CPU max MHz: 3100.0000 CPU min MHz: 400.0000 BogoMIPS: 5184.00 Virtualization: VT-x L1d cache: 32K L1i cache: 32K L2 cache: 256K L3 cache: 4096K NUMA node0 CPU(s): 0-3 ``` ## perf設定 依照 [perf原理與實務](https://hackmd.io/s/B11109rdg#) 步驟設定perf * 執行: ```$ sudo apt-get install linux-tools-common``` * 執行: ```$ perf top``` 接著會出現錯誤訊息須更改權限值進行後續效能分析 * 執行: ```$ sudo sh -c "echo -1 > /proc/sys/kernel/perf_event_paranoid"``` 並且輸入以下指令解除kernel pointer禁用 * 執行: ```$ sudo sh -c "echo 0 > /proc/sys/kernel/kptr_restrict"``` ## 程式效能分析(優化前) * 觀察優化前的資料結構型態: ``` $ vim ./phonebook_orig.h ``` ``` /* original version */ typedef struct __PHONE_BOOK_ENTRY { char lastName[MAX_LAST_NAME_SIZE]; char firstName[16]; char email[16]; char phone[10]; char cell[10]; char addr1[16]; char addr2[16]; char city[16]; char state[2]; char zip[5]; struct __PHONE_BOOK_ENTRY *pNext; } entry; ``` entry的資料結構型態為linked list 共計 136 bytes 由16+16+10+10+16+16+16+2+5+5(記憶體會有 [alignment](https://stackoverflow.com/questions/381244/purpose-of-memory-alignment) )+8( pointer size 在64 bit 為 8 bytes) * 了解優化前的搜尋程式: ``` $ vim ./phonebook_orig.c ``` ``` /* original version */ entry *findName(char lastName[], entry *pHead) { while (pHead != NULL) { if (strcasecmp(lastName, pHead->lastName) == 0) return pHead; pHead = pHead->pNext; } return NULL; } entry *append(char lastName[], entry *e) { /* allocate memory for the new entry and put lastName */ e->pNext = (entry *) malloc(sizeof(entry)); e = e->pNext; strcpy(e->lastName, lastName); e->pNext = NULL; return e; } ``` 可以清楚看到 findName() 為 linked list 的搜尋方式 另外 append() 則是在entry後新增entry並且分配記憶體來放置 lastName 了解原始程式碼架構後開始執行效能分析 * 執行: ``` $ echo 1 | sudo tee /proc/sys/vm/drop_caches ``` 首先清空cache 開始執行效能分析 * 執行: ``` $ ./phonebook_orig ``` ``` size of entry : 136 bytes execution time of append() : 0.079085 sec execution time of findName() : 0.005247 sec ``` 測試cache miss rate * 執行: ``` perf stat --repeat 100 -e cache-misses,cache-references,instructions,cycles ./phonebook_orig ``` * 結果: ``` Performance counter stats for './phonebook_orig' (100 runs): 461,9888 cache-misses # 93.254 % of all cache refs ( +- 0.07% ) 495,4080 cache-references ( +- 0.08% ) 2,6176,4908 instructions # 1.52 insn per cycle ( +- 0.02% ) 1,7224,3408 cycles ( +- 0.10% ) 0.058807717 seconds time elapsed ( +- 1.13% ) ``` cache miss 達93.254% 透過perf hotspot 進一步了解原因 * 執行: ``` $ sudo perf record -e cache-misses./phonebook_orig``` * 執行: ``` $ sudo perf report ``` * 結果: ``` Samples: 316 of event 'cache-misses', Event count (approx.): 4731251 Overhead Command Shared Object Symbol 53.21% phonebook_orig libc-2.23.so [.] __strcasecmp_l_avx 17.11% phonebook_orig phonebook_orig [.] findName 9.77% phonebook_orig [kernel.kallsyms] [k] clear_page_c_e 3.41% phonebook_orig [kernel.kallsyms] [k] _raw_spin_lock 2.35% phonebook_orig [kernel.kallsyms] [k] __rmqueue 2.32% phonebook_orig libc-2.23.so [.] __strcasecmp_avx 2.19% phonebook_orig [kernel.kallsyms] [k] free_pcppages_bulk 1.40% phonebook_orig [kernel.kallsyms] [k] copy_user_enhanced_fast_string 1.30% phonebook_orig [kernel.kallsyms] [k] get_page_from_freelist 1.16% phonebook_orig [kernel.kallsyms] [k] __dec_node_state 1.07% phonebook_orig [kernel.kallsyms] [k] try_charge 0.97% phonebook_orig [kernel.kallsyms] [k] free_hot_cold_page_list 0.59% phonebook_orig [kernel.kallsyms] [k] __alloc_pages_nodemask 0.53% phonebook_orig [kernel.kallsyms] [k] handle_mm_fault 0.48% phonebook_orig [kernel.kallsyms] [k] alloc_pages_vma 0.42% phonebook_orig [kernel.kallsyms] [k] mem_cgroup_try_charge 0.25% phonebook_orig [kernel.kallsyms] [k] pmd_page_vaddr 0.25% phonebook_orig [kernel.kallsyms] [k] get_mem_cgroup_from_mm 0.23% phonebook_orig ld-2.23.so [.] _dl_catch_error 0.15% phonebook_orig [kernel.kallsyms] [k] pte_lockptr.isra.15 0.13% phonebook_orig [kernel.kallsyms] [k] __vm_enough_memory ``` 主要hotspot是findName函數字串比對次數過多而佔了17.11% ## 程式效能分析(優化後) 優化方向目前有二: * 縮減entry資料結構大小 * 使用hash function進行搜尋 ### 縮減entry資料結構大小 ``` typedef struct __PHONE_BOOK_ITEM { char firstName[16]; char email[16]; char phone[10]; char cell[10]; char addr1[16]; char addr2[16]; char city[16]; char state[2]; char zip[5]; } item; typedef struct __PHONE_BOOK_ENTRY { char lastName[MAX_LAST_NAME_SIZE]; struct __PHONE_BOOK_ITEM *pitem; struct __PHONE_BOOK_ENTRY *pNext; }entry; ``` 在此電話簿搜尋中, 其 append() 與 findName() 主要以 last name 進行。 將 last name 從原先資料結構中移出, 建立只儲存 last name 且設立指針指向詳細資訊的struct。 ``` Performance counter stats for './phonebook_opt' (100 runs): 155,2555 cache-misses # 68.910 % of all cache refs ( +- 0.26% ) 225,3006 cache-references ( +- 0.10% ) 2,4438,8739 instructions # 2.09 insn per cycle ( +- 0.02% ) 1,1719,5806 cycles ( +- 0.12% ) 0.039599956 seconds time elapsed ( +- 0.70% ) ``` 刪減過後的 struct 進行分析後, 可發現 cache miss 從 93.254% 降至 68.910% ![](https://i.imgur.com/PeAsNNo.png) 同時相較原版本, append() 與 findName() 之執行時間也都下降  ### 使用hash function進行搜尋 hash function介紹(參考[Fundamental Data Structure](https://www.scribd.com/document/199819816/Fundamental-Data-Structures)) ``` A hash function is any algorithm or subroutine that mapslarge data sets of variable length, called keys, to smallerdata sets of a fixed length. For example, a person's name, having a variable length, could be hashed to a singleinteger. The values returned by a hash function are called hash values, hash codes, hash sums, checksums or simply hashes. ``` ![](https://i.imgur.com/5NhTi6a.png) 由圖示可發現, 若是兩筆資料( Josh Smith 與 Sam Doe )映射至同一值( 02 )時, 會產生 Collision 欲避免此種現象發生, 在這使用 hash table with chaining 方式, 在同一值之地址上建立 linked list 來串接此兩筆資料 參考[tina0405共筆](https://hackmd.io/GYFgpghgrAHDEFoAmUBsSHgMwCMERAGMBOBQgdlQEYAGGKnVYiGIA===?view), 主要進行 append() 資料放置上從 linked list 到 hash table 修改 ``` void *append(char lastName[], unsigned int pos) { while(strcmp(hashTable[pos]->lastName, "\000")) { hashTable[pos]->pNext = (slot_unit *) malloc(sizeof(slot_unit)); hashTable[pos]=hashTable[pos]->pNext; } strcpy(hashTable[pos]->lastName, lastName); hashTable[pos]->pNext = (slot_unit *) malloc(sizeof(slot_unit)); hashTable[pos]=hashTable[pos]->pNext; } ``` 參考[Yuron共筆](https://embedded2016.hackpad.com/ep/pad/static/NcHhQCQ4ijr), 注意到需將字串資料轉換為數值, 將每一字元相加轉為key ``` unsigned int stringToInt(char *key) { int number = 0; while (*key) number += (int)*key++; return number; } ``` 在使用hash function 並同時縮減 struct 資料結構的分析下, 其cache miss 從 68.910% 降至 43.553% ``` Performance counter stats for './phonebook_opt' (100 runs): 51,2191 cache-misses # 43.553 % of all cache refs ( +- 0.13% ) 117,6008 cache-references ( +- 0.73% ) 2,2735,9330 instructions # 2.06 insn per cycle ( +- 0.02% ) 1,1040,0258 cycles ( +- 0.35% ) 0.037077142 seconds time elapsed ( +- 0.39% ) ``` 同時 append() 與 findName() 之執行時間有所變化 append() 從 0.033114 升至 0.043364 秒 findName() 從 0.001892 降至 0.000121 秒 ## 參考資料 [perf原理與實務](https://hackmd.io/s/B11109rdg#) [phonebook作業解說](https://hackmd.io/s/HJJUmdXsZ#) [Fundamental Data Structure](https://www.scribd.com/document/199819816/Fundamental-Data-Structures) [paul5566共筆](https://hackmd.io/CYIwjAhgbArALMAtFAHMApouBmADCxFMXAY0QCYVySB2KEkGdOAMyA==#) [Hsiang共筆](https://hackmd.io/s/HylfV2FFe#) [st9007a共筆](https://hackmd.io/s/BJvNXiEib#) [tina0405共筆](https://hackmd.io/GYFgpghgrAHDEFoAmUBsSHgMwCMERAGMBOBQgdlQEYAGGKnVYiGIA===?view) [Yuron共筆](https://embedded2016.hackpad.com/ep/pad/static/NcHhQCQ4ijr)

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