twiecki
    • Create new note
    • Create a note from template
      • Sharing URL Link copied
      • /edit
      • View mode
        • Edit mode
        • View mode
        • Book mode
        • Slide mode
        Edit mode View mode Book mode Slide mode
      • Customize slides
      • Note Permission
      • Read
        • Only me
        • Signed-in users
        • Everyone
        Only me Signed-in users Everyone
      • Write
        • Only me
        • Signed-in users
        • Everyone
        Only me Signed-in users Everyone
      • Engagement control Commenting, Suggest edit, Emoji Reply
      • Invitee
    • Publish Note

      Share your work with the world Congratulations! 🎉 Your note is out in the world Publish Note

      Your note will be visible on your profile and discoverable by anyone.
      Your note is now live.
      This note is visible on your profile and discoverable online.
      Everyone on the web can find and read all notes of this public team.
      See published notes
      Unpublish note
      Please check the box to agree to the Community Guidelines.
      View profile
    • Commenting
      Permission
      Disabled Forbidden Owners Signed-in users Everyone
    • Enable
    • Permission
      • Forbidden
      • Owners
      • Signed-in users
      • Everyone
    • Suggest edit
      Permission
      Disabled Forbidden Owners Signed-in users Everyone
    • Enable
    • Permission
      • Forbidden
      • Owners
      • Signed-in users
    • Emoji Reply
    • Enable
    • Versions and GitHub Sync
    • Note settings
    • Engagement control
    • Transfer ownership
    • Delete this note
    • Save as template
    • Insert from template
    • Import from
      • Dropbox
      • Google Drive
      • Gist
      • Clipboard
    • Export to
      • Dropbox
      • Google Drive
      • Gist
    • Download
      • Markdown
      • HTML
      • Raw HTML
Menu Note settings Sharing URL Create Help
Create Create new note Create a note from template
Menu
Options
Versions and GitHub Sync Engagement control Transfer ownership Delete this note
Import from
Dropbox Google Drive Gist Clipboard
Export to
Dropbox Google Drive Gist
Download
Markdown HTML Raw HTML
Back
Sharing URL Link copied
/edit
View mode
  • Edit mode
  • View mode
  • Book mode
  • Slide mode
Edit mode View mode Book mode Slide mode
Customize slides
Note Permission
Read
Only me
  • Only me
  • Signed-in users
  • Everyone
Only me Signed-in users Everyone
Write
Only me
  • Only me
  • Signed-in users
  • Everyone
Only me Signed-in users Everyone
Engagement control Commenting, Suggest edit, Emoji Reply
Invitee
Publish Note

Share your work with the world Congratulations! 🎉 Your note is out in the world Publish Note

Your note will be visible on your profile and discoverable by anyone.
Your note is now live.
This note is visible on your profile and discoverable online.
Everyone on the web can find and read all notes of this public team.
See published notes
Unpublish note
Please check the box to agree to the Community Guidelines.
View profile
Engagement control
Commenting
Permission
Disabled Forbidden Owners Signed-in users Everyone
Enable
Permission
  • Forbidden
  • Owners
  • Signed-in users
  • Everyone
Suggest edit
Permission
Disabled Forbidden Owners Signed-in users Everyone
Enable
Permission
  • Forbidden
  • Owners
  • Signed-in users
Emoji Reply
Enable
Import from Dropbox Google Drive Gist Clipboard
   owned this note    owned this note      
Published Linked with GitHub
Subscribed
  • Any changes
    Be notified of any changes
  • Mention me
    Be notified of mention me
  • Unsubscribe
Subscribe
# PyMC 4.0 Release Announcement We, the PyMC core development team, are incredibly excited to announce the release of a major rewrite of PyMC (formerly PyMC3): `4.0.0`. There are many exciting new updates that we will talk about in this and upcoming blog posts. ## It's now called PyMC instead of PyMC3 First, the biggest news: **PyMC3 has been renamed to PyMC with this release. PyMC3 version 3.x will stay under the current name to not break production systems.** There are a few reasons for this. The main one is that PyMC3 4.0 is quite confusing. ## What about PyMC4? As described in our previous post ["The Future of PyMC3, or: Theano is Dead, Long Live Theano"](https://pymc-devs.medium.com/the-future-of-pymc3-or-theano-is-dead-long-live-theano-d8005f8a0e9b), we have experimented with (but given up on) a PyMC4 that was based on TensorFlow and TensorFlow Probability. One of the major reasons for this was (i) that TF was really difficult to work with, partly because of its eager execution mode, but, more importantly, (ii) we realized that `Theano` already was in a great spot to take `PyMC` to the next level. So to summarize, here are the names and what they refer to: * PyMC3 3.x: The version you all love and use, version numbers start with 3.x. * PyMC 4.0: The successor to PyMC3, (mostly) API compatible, our main focus going forward, and what this blog post is about. This is the only version that will matter going forward. Version numbers start with 4.x. * PyMC4: The discontinued experiment we did with new API on the TensorFlow backend. ## Theano -> Theano-PyMC -> Aesara So after we rediscovered the power of `Theano`, we went ahead and forked `Theano` to `Theano-PyMC` and made `PyMC3` rely on this fork instead. During this forking process we discovered that we could take this project much further still, so we undertook a massive rewrite of `Theano-PyMC` (this charge was led by Brandon Willard), removing swaths of old and obscure code, and restructuring the entire library to be more developer friendly. This rewrite motivated a rename of the package to [`Aesara`](https://github.com/aesara-devs/aesara) (Theano's daughter), and is now a project largely separate from PyMC, although PyMC is the main customer. Most imporantly, however, we added two new computational backends: `JAX` and `numba`. The way this works is that `aesara` is best understood as a computational graph library that allows you to build a computational graph out of array-operations (additions, multiplications, dot-products, indexing, for-loops). From that graph, you can do graph optimizations (`log(exp(x)) -> x`), symbolic rewrites (`N(0, 1) + a` -> `N(a, 1)`), as well as compile that graph, and here we have a ton of flexibility now and can add new compilation backends easily. Currently there is a `C`, `CUDA`, `JAX` (with GPU support), and `numba` backend. Future blog posts will go into more detail as to how to use these backends and their different trade-offs. ## New Features Most of the changes in `v4` happened under the hood and lead to lots of code simplifications and setting the stage for future innovations that were not possible before. However, there are quite a few good reasons to check out this new version already. ### Faster predictive sampling In `v3` we were not really using the full power of `Theano`. While calling e.g. `x = pm.Normal('x')` created a `theano.TensorVariable` which you could manipulate further, like inputting it into another random variable. However, we were not really building a full-fledged graph. This created all kinds of issues but a major one was a very complicated This is a major change in `4.0`. ### JAX backend ```python= import aesara aesara.config.mode = "JAX" # Default is "Mode" ``` ### Numba backend ```python= import aesara aesara.config.mode = "numba" # Default is "Mode" ``` ### Symbolic shapes ```python import pymc as pm with pm.Model() as m: x = pm.Poisson('x', 2) y = pm.Poisson('y', 2) z = pm.Normal('z', shape=(x, y)) print(z.eval()) print(z.eval()) ``` Produces ```python ``` ### Better NUTS initialization ### Scan-support ## What's not yet working Currently we are still missing a few features from `v3`. These should be hard to add and will be there for the `4.0` stable release. The list includes: * Potentials * Timeseries distributions * Mixture Distributions

Import from clipboard

Paste your markdown or webpage here...

Advanced permission required

Your current role can only read. Ask the system administrator to acquire write and comment permission.

This team is disabled

Sorry, this team is disabled. You can't edit this note.

This note is locked

Sorry, only owner can edit this note.

Reach the limit

Sorry, you've reached the max length this note can be.
Please reduce the content or divide it to more notes, thank you!

Import from Gist

Import from Snippet

or

Export to Snippet

Are you sure?

Do you really want to delete this note?
All users will lose their connection.

Create a note from template

Create a note from template

Oops...
This template has been removed or transferred.
Upgrade
All
  • All
  • Team
No template.

Create a template

Upgrade

Delete template

Do you really want to delete this template?
Turn this template into a regular note and keep its content, versions, and comments.

This page need refresh

You have an incompatible client version.
Refresh to update.
New version available!
See releases notes here
Refresh to enjoy new features.
Your user state has changed.
Refresh to load new user state.

Sign in

Forgot password

or

By clicking below, you agree to our terms of service.

Sign in via Facebook Sign in via Twitter Sign in via GitHub Sign in via Dropbox Sign in with Wallet
Wallet ( )
Connect another wallet

New to HackMD? Sign up

Help

  • English
  • 中文
  • Français
  • Deutsch
  • 日本語
  • Español
  • Català
  • Ελληνικά
  • Português
  • italiano
  • Türkçe
  • Русский
  • Nederlands
  • hrvatski jezik
  • język polski
  • Українська
  • हिन्दी
  • svenska
  • Esperanto
  • dansk

Documents

Help & Tutorial

How to use Book mode

Slide Example

API Docs

Edit in VSCode

Install browser extension

Contacts

Feedback

Discord

Send us email

Resources

Releases

Pricing

Blog

Policy

Terms

Privacy

Cheatsheet

Syntax Example Reference
# Header Header 基本排版
- Unordered List
  • Unordered List
1. Ordered List
  1. Ordered List
- [ ] Todo List
  • Todo List
> Blockquote
Blockquote
**Bold font** Bold font
*Italics font* Italics font
~~Strikethrough~~ Strikethrough
19^th^ 19th
H~2~O H2O
++Inserted text++ Inserted text
==Marked text== Marked text
[link text](https:// "title") Link
![image alt](https:// "title") Image
`Code` Code 在筆記中貼入程式碼
```javascript
var i = 0;
```
var i = 0;
:smile: :smile: Emoji list
{%youtube youtube_id %} Externals
$L^aT_eX$ LaTeX
:::info
This is a alert area.
:::

This is a alert area.

Versions and GitHub Sync
Get Full History Access

  • Edit version name
  • Delete

revision author avatar     named on  

More Less

Note content is identical to the latest version.
Compare
    Choose a version
    No search result
    Version not found
Sign in to link this note to GitHub
Learn more
This note is not linked with GitHub
 

Feedback

Submission failed, please try again

Thanks for your support.

On a scale of 0-10, how likely is it that you would recommend HackMD to your friends, family or business associates?

Please give us some advice and help us improve HackMD.

 

Thanks for your feedback

Remove version name

Do you want to remove this version name and description?

Transfer ownership

Transfer to
    Warning: is a public team. If you transfer note to this team, everyone on the web can find and read this note.

      Link with GitHub

      Please authorize HackMD on GitHub
      • Please sign in to GitHub and install the HackMD app on your GitHub repo.
      • HackMD links with GitHub through a GitHub App. You can choose which repo to install our App.
      Learn more  Sign in to GitHub

      Push the note to GitHub Push to GitHub Pull a file from GitHub

        Authorize again
       

      Choose which file to push to

      Select repo
      Refresh Authorize more repos
      Select branch
      Select file
      Select branch
      Choose version(s) to push
      • Save a new version and push
      • Choose from existing versions
      Include title and tags
      Available push count

      Pull from GitHub

       
      File from GitHub
      File from HackMD

      GitHub Link Settings

      File linked

      Linked by
      File path
      Last synced branch
      Available push count

      Danger Zone

      Unlink
      You will no longer receive notification when GitHub file changes after unlink.

      Syncing

      Push failed

      Push successfully