# MBG4421 Uygulama
## Gen seçimi
Gerekli linkler:
* Rastgele insan geni seçimi için [link](http://www.molbiotools.com/randomgenesetgenerator.html) (liste uzunluğu `1` olarak seçilebilir)
* [Genbank Nucleotide](https://www.ncbi.nlm.nih.gov/nuccore/)
* [USCS Genome Browser](https://genome-euro.ucsc.edu/cgi-bin/hgGateway)
* [ENSEMBL](https://www.ensembl.org/Homo_sapiens/Info/Index)
# BRCA1
Alper Yılmaz
Genbank: [74572](https://www.ncbi.nlm.nih.gov/nuccore/?term=BRCA1)
RefSeq: 31355
RefSeq (*H.sapiens*): 566
Bakteride var mı?: Yok (RefSeq'ten önce vardı :cry: )
NCBI Gene ID: [672](https://www.ncbi.nlm.nih.gov/gene/672)
Kromozomdaki yeri: Chr17: 43,044,295-43,125,483
ENSEMBL id: [ENSG00000012048](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000012048;r=17:43044295-43170245)
Transkript sayısı: 34
İlk transkript (ENST...): ENST00000471181.7
İlk ekzon (ENSE...) kromozom başlangıç-bitiş: ENSE00001946433 43,125,483-43,125,271
Bu ekzona denk gelen ilk SNP id: [Yok](https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=hg38&lastVirtModeType=default&lastVirtModeExtraState=&virtModeType=default&virtMode=0&nonVirtPosition=&position=chr17%3A43125271%2D43125483&hgsid=244832125_KmAuTZTxZPGHF2aIaKEb0lAmBwTA) Ama, sondan 3. ekzonzdaki SNP id: [rs1800062](https://www.ncbi.nlm.nih.gov/snp/rs1800062)
# VN1R2
Mert Kaya :mask:
Genbank: [27](https://www.ncbi.nlm.nih.gov/nuccore/?term=VN1R2)
RefSeq: 4
RefSeq (*H.sapiens*): 2
NCBI Gene ID:[317701](https://www.ncbi.nlm.nih.gov/gene/317701)
Kromozomdaki yeri: Chr19: 53,258,292-53,259,602
Bakteride var mı?: Yok
ENSEMBL id: [ENSG00000196131](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000196131;r=19:53258292-53261837)
Transkript sayısı: 2
İlk transkript (ENST...): ENST00000341702.3
İlk ekzon (ENSE...) kromozom başlangıç-bitiş: ENSE00001414621 53,258,292-53,259,602
Bu ekzona denk gelen ilk SNP id: [UCSC link](https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=hg38&lastVirtModeType=default&lastVirtModeExtraState=&virtModeType=default&virtMode=0&nonVirtPosition=&position=chr19%3A53258286%2D53259596&hgsid=244831090_Kskbjlbt5OI75FBCcaW6BNS7xmTW) [rs61576844](https://genome-euro.ucsc.edu/cgi-bin/hgc?hgsid=244831090_Kskbjlbt5OI75FBCcaW6BNS7xmTW&c=chr19&l=53258285&r=53259596&o=53258337&t=53258338&g=dbSnp153Common&i=rs61576844)
# FOXN4
simge emlik
Genbank:[1306]
RefSeq:887
RefSeq (*H.sapiens*):6
Bakteride var mı?: Yok
NCBI Gene ID:121643
Kromozomdaki yeri:Chromosome 12: 109,277,978-109,309,284
ENSEMBL id: [ENSG00000139445]
Transkript sayısı:4
İlk transkript (ENST...):ENST00000299162.10
İlk ekzon (ENSE...) kromozom başlangıç-bitiş: ENSG00000139445.18 109,715,783-109,747,089
Bu ekzona denk gelen ilk SNP id:
# CYP17A1-AS1
Mehmet Emin ORHAN
Genbank: [2](https://www.ncbi.nlm.nih.gov/nuccore/?term=CYP17A1-AS1)
RefSeq: 2
RefSeq (*H.sapiens*): 2
Bakteride var mı?:Yok
NCBI Gene ID: [102724307](https://www.ncbi.nlm.nih.gov/gene/102724307)
Kromozomdaki yeri:Chromosome 10: 102,743,948-102,816,262
ENSEMBL id: [ENSG00000166272](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000166272;r=10:102743948-102834516)
Transkript sayısı: 4
İlk transkript (ENST...): ENST00000448841.7
İlk ekzon (ENSE...) kromozom başlangıç-bitiş:
ENSE00003835582 102,743,948-102,744,143
Bu ekzona denk gelen ilk SNP id:[UCSC link](https://genome-euro.ucsc.edu/cgi-bin/hgGene?hgg_gene=ENST00000448841.7&hgg_prot=uc001kwf.7&hgg_chrom=chr10&hgg_start=102743947&hgg_end=102816262&hgg_type=knownGene&db=hg38&hgsid=244832139_DVS4gtDJlrSYdwuYWC0cdh8GMjtl) [Genome Browser](https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=hg38&lastVirtModeType=default&lastVirtModeExtraState=&virtModeType=default&virtMode=0&nonVirtPosition=&position=chr10%3A102743899%2D102744192&hgsid=244832139_DVS4gtDJlrSYdwuYWC0cdh8GMjtl)
# STX10
Şeyda AYDIN
GenBank: [688](https://www.ncbi.nlm.nih.gov/nuccore/?term=STX10)
RefSeq: 615
RefSeq (*H.sapiens*): 6
Bakteride var mı?: Yok
NCBI Gene ID: [8677](https://www.ncbi.nlm.nih.gov/gene/8677)
Kromozomdaki yeri: Chromosome 19: 13,144,058-13,150,375
ENSEMBL id: [ENSG00000104915](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000104915;r=19:13144058-13150383)
Kaç transkript var? 11
İlk transkript (ENST...): [ENST00000587230.6](https://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000104915;r=19:13144058-13150383;t=ENST00000587230)
İlk ekzon (ENSE...) kromozom başlangıç-bitiş: ENSE00001374244 13,150,375 13,150,139
Bu ekzona denk gelen ilk SNP id: [rs4926138](https://genome-euro.ucsc.edu/cgi-bin/hgc?hgsid=244833214_yzAyQT02dIrx2vrwP6yzCK6BQfQ6&c=chr19&l=13150135&r=13150372&o=13150270&t=13150271&g=dbSnp153Common&i=rs4926138) and [Genome Browser](https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=hg38&lastVirtModeType=default&lastVirtModeExtraState=&virtModeType=default&virtMode=0&nonVirtPosition=&position=chr19%3A13150136%2D13150372&hgsid=244833214_yzAyQT02dIrx2vrwP6yzCK6BQfQ6)
# RNF38
Beyzanur ŞAHİN
Genbank:[3613](https://www.ncbi.nlm.nih.gov/nuccore/?term=RNF38)
RefSeq:[3033](https://www.ncbi.nlm.nih.gov/nuccore)
RefSeq (*H.sapiens*):[18](https://www.ncbi.nlm.nih.gov/nuccore)
Bakteride var mı?:Yok
NCBI Gene ID:[152006](https://www.ncbi.nlm.nih.gov/gene/152006)
Kromozomdaki yeri:[Chr9:36,336,396-36,487,548](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000137075;r=9:36336396-36487548)
ENSEMBL id:[ENSG00000137075](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000137075;r=9:36336396-36487548)
Transkript sayısı:[10](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000137075;r=9:36336396-36487548)
İlk transkript (ENST...):[ENST00000259605.11](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000137075;r=9:36336396-36487548)
İlk ekzon (ENSE...) kromozom başlangıç-bitiş:[ENSE00001906081 36,400,269-36,400,097](https://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000137075;r=9:36336396-36487548;t=ENST00000259605)
Bu ekzona denk gelen ilk SNP id:[rs2480459 C/T](https://www.ncbi.nlm.nih.gov/snp/rs2480459) [UCSC linki](https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=hg38&lastVirtModeType=default&lastVirtModeExtraState=&virtModeType=default&virtMode=0&nonVirtPosition=&position=chr9%3A36400096%2D36400268&hgsid=244833653_Qobgcq7q3wKnAS20soAADOXqrgkc)
# VEGFA
Zeynep Yağmur Karagülleoğlu
Genbank: [4359](https://www.ncbi.nlm.nih.gov/nuccore/?term=VEGFA)
RefSeq: [1702](https://www.ncbi.nlm.nih.gov/nuccore)
RefSeq (H.sapiens): [241](https://www.ncbi.nlm.nih.gov/nuccore)
Bakteride var mı?:-
NCBI Gene ID:[7422](https://www.ncbi.nlm.nih.gov/gene/7422)
Kromozomdaki yeri: chr6: 43,770,163-43,771,362
ENSEMBL id:[ENSG00000112715](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000112715;r=6:43770163-43771362;t=ENST00000372067)
Transkript sayısı: [26](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000112715;r=6:43770163-43771362;t=ENST00000372067)
İlk transkript (ENST…):[ENST00000372067.7](https://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000112715;r=6:43770163-43771362;t=ENST00000372067)
İlk ekzon (ENSE…) kromozom başlangıç-bitiş:[ENSE00001873566 43,770,213 43,771,312](https://www.ensembl.org/Homo_sapiens/Location/View?db=core;g=ENSG00000112715;r=6:43770163-43771362;t=ENST00000372067)
Bu ekzona denk gelen ilk SNP id:[rs528641022](http://genome.cse.ucsc.edu/cgi-bin/hgc?hgsid=924951449_aZalB5FgvnWpaY4dxpb3ppL8Rank&c=chr6&l=43770162&r=43771362&o=43770390&t=43770399&g=dbSnp153Common&i=rs528641022)
# TTLL1
Mert Can Dönmez
Genbank: [2863](https://www.ncbi.nlm.nih.gov/nuccore/?term=TTLL1)
RefSeq: 2,188
RefSeq (*H.sapiens*): 32
Bakteride var mı?: Yok
ENSEMBL id: ENSG00000100271
Transkript sayısı: 4
İlk transkript (ENST...): ENST00000266254.12
İlk ekzon (ENSE...) kromozom başlangıç-bitiş:
ENSE00001524460 43,089,391 - 43,089,277
Bu ekzona denk gelen ilk SNP id:
dbSNP: [rs139095621](https://genome-euro.ucsc.edu/cgi-bin/hgc?hgsid=244834542_kIvv3sx4vd1THlak8SBiYa4TZD3S&c=chr19&l=53258285&r=53259596&o=53258354&t=53258355&g=dbSnp153Common&i=rs139095621) [link2](https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=hg38&lastVirtModeType=default&lastVirtModeExtraState=&virtModeType=default&virtMode=0&nonVirtPosition=&position=chr19%3A53258286-53259596&hgsid=244834542_kIvv3sx4vd1THlak8SBiYa4TZD3S)
# GPRIN3
Taimaa Alsaaour
Genbank: [1213](https://www.ncbi.nlm.nih.gov/nuccore/?term=GPRIN3)
RefSeq: 853
RefSeq (*H.sapiens*): 6
Bakteride var mı?: Yok
NCBI Gene ID: [285513](https://www.ncbi.nlm.nih.gov/gene/285513)
Kromozomdaki yeri: chr 4: 89,236,383-89,307,800
Transkript sayısı: 2
ENSEMBL id: [ENSG00000185477](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000185477;r=4:89236383-89307800)
İlk transkript (ENST...): ENST00000609438.2
İlk ekzon (ENSE...) kromozom başlangıç-bitiş: ENSE00001373476 89,307,800-89,307,615
Bu ekzona denk gelen ilk SNP id: [rs28378092](https://genome-euro.ucsc.edu/cgi-bin/hgc?hgsid=244833943_NWeTV53g6jhp91F00BJYFZavnPuJ&c=chr4&l=89307614&r=89307800&o=89307655&t=89307656&g=dbSnp153Common&i=rs28378092)
HİN: FRMD5
# CTNNB1
Merve Gençer
Genbank: 78091
RefSeq: 7606
RefSeq (*H.sapiens*): 126
Bakteride var mı?: Var
NCBI Gen id: 1499
Kromozomdaki Yeri: Chromosome 3: 41,220,551-41,239,888
ENSEMBL id:ENSG00000168036
Transkript sayısı: 1409
İlk transkript (ENST...): ENST00000645320.1
İlk ekzon (ENSE...) kromozom başlangıç-bitiş: ENSE00003830805 41,194,741-41,239,949
Bu ekzona denk gelen ilk SNP id:
# ASAP1-IT2
Batuhan Faruk Yıldırım
Genbank:
RefSeq:
RefSeq (*H.sapiens*):
Bakteride var mı:
ENSEMBLE id:
# SNORD26
Fatma Nihal Yetgin
Genbank:[350](https://www.ncbi.nlm.nih.gov/nuccore/?term=SNORD26)
RefSeq: 345
RefSeq (*H.sapiens*):
Bakteride var mı?:yok
NCBI Gene ID:[9302]
Kromozomdaki yeri: Chr11:62,855,292-62,855,366
ENSEMBL id: [ENSG00000276788](https://www.ensembl.org/Multi/Search/Results?q=snord26;site=ensembl_all)
Transkript sayısı:
İlk transkript (ENST...):[ENST00000384147]
İlk ekzon (ENSE...) kromozom başlangıç-bitiş:
Bu ekzona denk gelen ilk SNP id:
# SMG2
# ZNF480
Beyza Dönmüş
Genbank:[135](https://www.ncbi.nlm.nih.gov/nuccore/?term=ZNF480)
RefSeq: 79
RefSeq (*H.sapiens*): 9
Bakteride var mı?: Yok
ENSEMBL id:[ENSG00000198464](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000198464;r=19:5922)
Transkript sayısı: 8
Kromozomdaki Yeri: CHR19: 52,297,169-52,325,922
İlk ekzon (ENSE...) kromozom başlangıç-bitiş: ENSE00001952632 52,297,179-52,297,223
Bu ekzona denk gelen ilk SNP id: [rs1979147](https://genome-euro.ucsc.edu/cgi-bin/hgc?hgsid=244833316_9taHa5z5u2YAaa7aW2fRVWWZSUUm&c=chr19&l=52297168&r=52325922&o=52297393&t=52297394&g=dbSnp153Common&i=rs197
# RARB
Çilem Özdemir
Genbank: [2032](https://www.ncbi.nlm.nih.gov/nuccore/?term=RARB)
RefSeq: [1415](https://www.ncbi.nlm.nih.gov/nuccore)
RefSeq (*H.sapiens*): 19
Bakteride var mı?: var
ENSEMBL id: ENSG00000077092
Transkript sayısı: 8
İlk transkript (ENST...): ENST00000330688.9
İlk ekzon (ENSE...) kromozom başlangıç-bitiş: ENSE00001240766 25,428,263-25,428,888
Bu ekzona denk gelen ilk SNP id: rs1055848049
# WHSC1
Vildan SARAÇ
GenBank: [??](https://www.ncbi.nlm.nih.gov/nuccore/?term=WHSC1)
RefSeq: 2365
RefSeq (*H.sapiens*): 33
Bakteride var mı?: Yok
ENSEMBL id:
Kaç transkript var?
İlk transkript (ENST...):
İlk ekzon (ENSE...) kromozom başlangıç-bitiş:
Bu ekzona denk gelen ilk SNP id:
# BMP5
Kosar Zad G. Vahdat:
Genbank:1346
RefSeq: 908
RefSeq (*H.sapiens*): 9
Bakteride var mı?: var
ENSEMBL id: ENSG00000112175
Transkript sayısı: 666
İlk transkript (ENST...): ENST00000370830.4
İlk ekzon (ENSE...) kromozom başlangıç-bitiş: ENSE00001864172 55,875,590 55,874,376
Bu ekzona denk gelen ilk SNP id:
# HRASLS5
Sena Güler
Genbank:[291](https://www.ncbi.nlm.nih.gov/nuccore/?term=HRASLS5)
RefSeq:[232](https://www.ncbi.nlm.nih.gov/nuccore)
RefSeq (H.sapiens):10
Bakteride var mı?:yok
ENSEMBL id:[ENSG00000168004](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000168004;r=11:63461404-63491194)
Transkript sayısı:6
İlk transkript (ENST…):[ENST00000540857.5](https://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000168004;r=11:63461404-63491194;t=ENST00000540857)
İlk ekzon (ENSE…) kromozom başlangıç-bitiş:ENSE00002278246 63,491,167 63,490,887
Bu ekzona denk gelen ilk SNP id: rs10897424
# TSEN34
Ayça Kavakçıoğlu
Genbank:[1160](https://www.ncbi.nlm.nih.gov/nuccore)
RefSeq:[963](https://www.ncbi.nlm.nih.gov/nuccore)
RefSeq (*H.sapiens*):20
Bakteride var mı?:Yok
ENSEMBL id:[ENSG00000170892 ](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000170892;r=19:54189938-54194536)
Transkript sayısı:10
İlk transkript (ENST...):ENST00000617543.1
İlk ekzon (ENSE...) kromozom başlangıç-bitiş: ENSE00003748320 54,190,698 - 54,190,801
Bu ekzona denk gelen ilk SNP id:rs79447697
# SIX3
Metehan Gazioğlu
Genbank: [18](https://www.ncbi.nlm.nih.gov/gene/?term=Homo+sapiens+SIX3)
RefSeq: 569
RefSeq (*H.sapiens*): 18
Bakteride var mı?: Yok
NCBI Gene Id: 6496
Kromozomdaki yeri: Chromosome 2: 44,941,702-44,946,071
ENSEMBL id: [ENSG00000138083](https://www.ensembl.org/Human/Search/Results?q=SIX3;site=ensembl;facet_species=Human)
Transkript sayısı: 1
İlk transkript (ENST...): ENST00000260653
İlk ekzon (ENSE...) kromozom başlangıç-bitiş:ENSE00000809780 44,941,702-44,942,910
Bu ekzona denk gelen ilk SNP id: [rs779363934](https://genome-euro.ucsc.edu/cgi-bin/hgc?hgsid=245624991_8H0y013DMTDd4aYkA7G320rpPKwk&c=chr2&l=44941701&r=44946071&o=44941704&t=44941705&g=snp144&i=rs779363934)
# APOE
Sinan Ünal
Genbank:
RefSeq:739
RefSeq (*H.sapiens*) :125
Bakteride var mı?:-
NCBI Gene Id:348
Kromozomdaki yeri:Kromozom 19
ENSEMBL id:ENSG00000130203
Transkript sayısı:5
İlk transkript (ENST...):ENST00000252486.9
İlk ekzon (ENSE...) kromozom başlangıç-bitiş: ENSE00001048576 44.905.796 44.905.841
Bu ekzona denk gelen ilk SNP id:
# SNURF
Burak Öz:SNURF
Genbank:751
RefSeq:
RefSeq (H.sapiens):
Bakteride var mı?:
ENSEMBL id:
Transkript sayısı:
İlk transkript (ENST…):
İlk ekzon (ENSE…) kromozom başlangıç-bitiş:
Bu ekzona denk gelen ilk SNP id:
# RIC1
Ata Reisoğlu
Genbank: [4978](https://www.ncbi.nlm.nih.gov/nuccore/?term=RIC1)
RefSeq: 2474
RefSeq (H.sapiens): 20
Bakteride var mı?: VAR
ENSEMBL id: [ENSG00000107036](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000107036;r=9:5629025-5776557)
Transkript sayısı: 7
İlk transkript (ENST…): [ENST00000414202.7](https://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000107036;r=9:5629025-5776557;t=ENST00000414202)
Kromozomdaki Yeri: Chromosome 9: 5,629,025-5,776,557
İlk ekzon (ENSE…) kromozom başlangıç-bitiş: [ENSE00003841574](https://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000107036;r=9:5629025-5776557;t=ENST00000414202) 5,629,107-5,629,453
Bu ekzona denk gelen ilk SNP id: [UCSC LINK](https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=hg38&lastVirtModeType=default&lastVirtModeExtraState=&virtModeType=default&virtMode=0&nonVirtPosition=&position=chr9%3A5629107%2D5629453&hgsid=244831090_Kskbjlbt5OI75FBCcaW6BNS7xmTW) [rs4471106](https://www.ncbi.nlm.nih.gov/snp/rs4471106)
# MTHFR
Ebru Durur
Genbank:4524
Refseq:10
Refseq homo sapiens 9
Bakteride var mı:yok
NCBI GENE ID:ENSG00000177000
Kromozom yeri:Chromosome 1: 11,785,723-11,805,413
ENSEMBL id: [ENSG00000177000.13](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000177000;r=1:11785723-11806455)
transkrip sayısı: 19
ilk transkrip: [ENSG00000177000](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000177000;r=1:11785723-11806455)
ilk ekzon (ENSE) kromozom bitiş başlangıç [ENSG00000177000](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000177000;r=1:11785723-11806455)
Bu ekzona denk gelen ilk SNP İd:dbSNP build 144 [rs746013434](https://genome-euro.ucsc.edu/cgi-bin/hgc?hgsid=244837125_YaWkZgyL0cQQzL83tkSZ8RjJgiAv&c=chrX&l=15560137&r=15602945&o=15560195&t=15560196&g=snp144&i=rs746013434)
# PSMG2
Ayşe Kurt
Genbank:[27](https://www.ncbi.nlm.nih.gov/nuccore/?term=Homo+sapiens+PSMG2)
RefSeq:[4]
RefSeq (*H.sapiens *):[3]
Bakteride var mı?: YOK
NCBI Gene ID: [56984]
Kromozomdaki yeri: [Chromosome 18: 12,658,043-12,725,740](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000128789;r=18:12658043-12725740)
ENSEMBL id: [ENSG00000128789](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000128789;r=18:12658043-12725740)
Transkript sayısı: [10]
İlk transkript (ENST...): [ENST00000317615.11]
İlk ekzon (ENSE...) kromozom başlangıç-bitiş: [ ENSE00001336481 12,703,042 12,703,164]
Bu ekzona denk gelen ilk SNP id: [rs80236912 T/C](https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=hg38&lastVirtModeType=default&lastVirtModeExtraState=&virtModeType=default&virtMode=0&nonVirtPosition=&position=chr18%3A12703042%2D12725740&hgsid=244832125_KmAuTZTxZPGHF2aIaKEb0lAmBwTA)
# HLA-G
Merve Aydın
GenBank: [1215](https://www.ncbi.nlm.nih.gov/nuccore/?term=HLA-G)
RefSeq: 40
RefSeq (H.sapiens): 33
Bakteride var mı?: Yok :-1:
NCBI Gene ID: [3135](https://www.ncbi.nlm.nih.gov/gene/3135)
Kromozomdaki yeri: Chromosome 6: 29,826,967-29,831,125
ENSEMBL id: [ENSG00000204632](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000204632;r=6:29826967-29831125)
Kaç transkript var? : 7
İlk transkript (ENST…): [ENST00000428701.5](https://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000204632;r=6:29826967-29831125;t=ENST00000428701)
İlk ekzon (ENSE…) kromozom başlangıç-bitiş: ENSE00001609755 29,826,979 29,827,044
Bu ekzona denk gelen ilk SNP id: [Bulunamadı](https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=hg38&lastVirtModeType=default&lastVirtModeExtraState=&virtModeType=default&virtMode=0&nonVirtPosition=&position=chr6%3A29826979%2D29831122&hgsid=244836106_h1VGK2ISb5eaWS9NBsB89sANlHZj)
# ROS1
Ceren ÇİFTÇİ
Genbank: [2283](https://www.ncbi.nlm.nih.gov/nuccore/?term=ros1)
RefSeq: [1223](https://www.ncbi.nlm.nih.gov/nuccore)
RefSeq (H.sapiens): [87](https://www.ncbi.nlm.nih.gov/nuccore)
Bakteride var mı?: Yok
NCBI Gene ID: [6098](https://www.ncbi.nlm.nih.gov/gene/6098)
Kromozomdaki yeri: Chr6: 117,288,300-117,425,855
ENSEMBL id: [ENSG00000047936](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000047936;r=6:117288300-117425855)
İlk transkript (ENST…): ENST00000368508.7
İlk ekzon (ENSE…) kromozom başlangıç-bitiş: [ENSE00001013392 117,425,855 117,425,534](https://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000047936;r=6:117288300-117425855;t=ENST00000368508)
Bu ekzona denk gelen ilk SNP id: [rs1216874499](https://www.ncbi.nlm.nih.gov/snp/rs1216874499) [UCSC link](https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=hg38&lastVirtModeType=default&lastVirtModeExtraState=&virtModeType=default&virtMode=0&nonVirtPosition=&position=chr6%3A117425852%2D117425855&hgsid=245169233_odsXBomamTczO7OMnNcViZt5VaUi)
# HUS1
Miray Karameşe
Genbank:[2,728](https://www.ncbi.nlm.nih.gov/nuccore/?term=HUS1)
RefSeq:[3,744]
RefSeq (H.sapiens): [52]
Bakteride var mı?:[var]
Gene ID: [3364]
ENSEMBL id: [ENSG00000136273](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000136273;r=7:47963288-47979615)
Kromozomdaki Yeri:[Chromosome 7: 47,963,288-47,979,615 reverse strand.](https://www.ensembl.org/Homo_sapiens/Location/View?db=core;g=ENSG00000136273;r=7:47963288-47979615)
Transkript sayısı[8]
İlk transkript (ENST…): [ENST00000258774.10](https://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000136273;r=7:47963288-47979615;t=ENST00000258774)
İlk ekzon (ENSE…) kromozom başlangıç-bitiş: [ ENSE00001819062 47,979,615 47,979,468](https://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000136273;r=7:47963288-47979615;t=ENST00000258774)
Bu ekzona denk gelen ilk SNP id:[rs3176621](https://genome.ucsc.edu/cgi-bin/hgc?hgsid=924944619_ElFuwZNuiTriWhSSInwcB5kQ2BeR&c=chr7&l=47963287&r=47979615&o=47963297&t=47963298&g=snp144&i=rs3176621)
# LEO1
hursima izgiş
Genbank: [2,422](https://www.ncbi.nlm.nih.gov/nuccorehttps://www.ncbi.nlm.nih.gov/nuccorehttps://www.ncbi.nlm.nih.gov/nuccorehttps://www.ncbi.nlm.nih.gov/nuccorehttps://www.ncbi.nlm.nih.gov/nuccore)
RefSeq:[2,421](https://www.ncbi.nlm.nih.gov/nuccore)
RefSeq (H.sapiens):[16]
Bakteride var mı?:[VAR]
NCBIGeneID: [123169](https://www.ncbi.nlm.nih.gov/nuccore)
ENSEMBL id:[ENSG00000166477](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000166477;r=15:51938025-51971778)
Kromozomdaki yeri: [Chromosome 15: 51,938,025-51,971,778](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000166477;r=15:51938025-51971778)
Transkript sayısı:[3](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000166477;r=15:51938025-51971778)
İlk transkript (ENST…):[ENST00000299601.10](https://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000166477;r=15:51938025-51971778;t=ENST00000299601)
İlk ekzon (ENSE…) kromozom başlangıç-bitiş: [ENSE00001868211 51,971,778 51,971,688](https://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000166477;r=15:51938025-51971778;t=ENST00000299601)
Bu ekzona denk gelen ilk SNP id:[rs185215738](https://genome.ucsc.edu/cgi-bin/hgc?hgsid=924945195_nmVQQkaVivYnrAbXFiaBtQXKAzYl&c=chr15&l=51936957&r=51971391&o=51936967&t=51936968&g=snp151&i=rs185215738)
# ABCE1
Göknur Erol
Genbank:[732](https://www.ncbi.nlm.nih.gov/nuccore/?term=ABCE1)
RefSeq:1,927
RefSeq (H.sapiens): [24](https://www.ncbi.nlm.nih.gov/nuccore/?term=Homo+Sapiens+ABCE1)
Bakteride var mı?: Var
NCBI Gene ID: [6059] (https://www.ncbi.nlm.nih.gov/gene/6059)
Kromozomdaki Yeri: Chr4: 145,098,311 - 145,129,524
ENSEMBL ID: [ENSG00000164163](http://www.ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000164163;r=4:145098288-145129524)
Transkript sayısı: 10
İlk transkript (ENST...): ENST00000296577.9
İlk ekzon (ENSE...) kromozom başlangıç-bitiş: [ENSE00002024138 145,098,311-145,098,419]
Bu ekzona denk gelen ilk SNP id:[rs201780921](http://www.ensembl.org/Homo_sapiens/Variation/Explore?db=core;g=ENSG00000164163;r=4:145098288-145129524;source=dbSNP;t=ENST00000296577;v=rs201780921;vdb=variation;vf=128604617)
# NETO1
Büşra Tayhan
Genbank: [1822](https://www.ncbi.nlm.nih.gov/nuccore/?term=NETO1)
RefSeq: 1460
RefSeq (H.sapiens): 24
Bakteride var mı?: YOK
ENSEMBL id: [ENSG00000166342](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000166342;r=18:72742314-72868146)
Transkript sayısı: 7
İlk transkript (ENST…): [ENST00000327305.11](https://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000166342;r=18:72742314-72868146;t=ENST00000327305)
İlk ekzon (ENSE…) kromozom başlangıç-bitiş: [ENSE00001179973](https://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000166342;r=18:72742314-72868146;t=ENST00000327305) 72,867,987-72,867,264
Bu ekzona denk gelen ilk SNP id: [UCSC Link](https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=hg38&lastVirtModeType=default&lastVirtModeExtraState=&virtModeType=default&virtMode=0&nonVirtPosition=&position=chr7%3A72867259%2D72867982&hgsid=244831090_Kskbjlbt5OI75FBCcaW6BNS7xmTW) [rs149469880](https://www.ncbi.nlm.nih.gov/snp/rs149469880)
# NCOA4
Mustafa Tankuş
Genbank:[360](https://www.ncbi.nlm.nih.gov/nuccore/?term=NCOA4)
RefSeq:[0]
RefSeq (H.sapiens):[15]
Bakteride var mı?:[YOK]
Gene ID:[8031]
ENSEMBL id:[ENSG00000266412](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000266412;r=10:46005088-46030714)
Kromozomdaki Yeri:[Chromosome 10: 46,005,088-46,030,714](https://www.ensembl.org/Homo_sapiens/Location/View?db=core;g=ENSG00000266412;r=10:46005088-46030714)
Transkript sayısı:[7]
İlk transkript (ENST…):[ENST00000581486.5]
İlk ekzon (ENSE…) kromozom başlangıç-bitiş: [ENSE00002725494 46,030,714 46,030,526](https://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000266412;r=10:46005088-46030714;t=ENST00000581486)
Bu ekzona denk gelen ilk SNP id: [rs201479189](https://genome.ucsc.edu/cgi-bin/hgc?hgsid=924970267_Sbcpi15Xp5ablYguUurM7czedTqJ&c=chr10&l=46006411&r=46030607&o=46006542&t=46006543&g=snp144&i=rs201479189)
# SH3GLB2
Kerem Erdoğan
Genbank:[1987](https://www.ncbi.nlm.nih.gov/nuccore/?term=SH3GLB2)
RefSeq:1789
RefSeq (H.sapiens): [16](https://www.ncbi.nlm.nih.gov/nuccore)
Bakteride var mı?:Yok
Gene ID:[56904](https://www.ncbi.nlm.nih.gov/gene/56904)
ENSEMBL ID:[ENSG00000148341](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000148341;r=9:129007036-129028331)
Kromozomdaki Lokasyonu:Chr9: 129,007,036-129,028,331
Transksript Sayısı:12
İlk Transkript (ENST...):[ENST00000372564.8](https://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000148341;r=9:129007036-129028331;t=ENST00000372564)
İlk Ekzon (ENSE..) kromozom başlangıç-bitiş:[ENSE00001458108](https://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000148341;r=9:129007036-129028331;t=ENST00000372564) 129,028,331-129,028,092
Bu ekzona denk gelen ilk SNP ID: [rs11537529](https://genome-euro.ucsc.edu/cgi-bin/hgc?hgsid=244914903_5u0IRTcJu1tIbvAkzQTiyXKzAIfN&c=chr9&l=129028091&r=129028331&o=129028251&t=129028252&g=dbSnp153Common&i=rs11537529)
# SP1
Bilge Kabataş
Genbank:[193879](https://www.ncbi.nlm.nih.gov/nuccore)
RefSeq: 3835
RefSeq (H.sapiens): [569]
Bakteride var mı?:yok
Gene ID:6667
ENSEMBL ID:[ENSG00000185591](http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000185591;r=12:53380176-53416446)
Kromozomdaki Lokasyonu: Chromosome 12: 53,380,176-53,416,446
Transksript Sayısı:4
İlk Transkript (ENST...):[ENST00000327443.9](http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000185591;r=12:53380176-53416446;t=ENST00000327443)
İlk Ekzon (ENSE..) kromozom başlangıç-bitiş: [ENSE00002328883](http://www.ensembl.org/Homo_sapiens/Transcript/Exons?db=core;g=ENSG00000185591;r=12:53380176-53416446;t=ENST00000327443) 53,380,176-53,380,298
Bu ekzona denk gelen ilk SNP ID: [YOK](https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=hg38&lastVirtModeType=default&lastVirtModeExtraState=&virtModeType=default&virtMode=0&nonVirtPosition=&position=chr12%3A53380185%2D53380307&hgsid=244932070_Tb3QTZFLMIuSppPDoeuqYqrvwRTa)
# CXCL5
Çağla Merve Bayram
Genbank:[301](https://www.ncbi.nlm.nih.gov/nuccore/?term=CXCL5)
Refseq: [69]
Refseq (H.sapiens):[8]
Bakteride var mı?: Yok
NCBI Gene ID:[6374](https://www.ncbi.nlm.nih.gov/gene/6374)
ENSEMBL ID:[ENSG00000163735](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000163735;r=4:73995642-73998677;t=ENST00000296027)
Kromozomdaki lokasyonu:Chromosome 4: 73,995,642-73,998,677
Transkript Sayısı:1
İlk transkript (ENST...):ENST00000296027.5
İlk ekzon (ENSE..)Kromozom başlangıç-bitiş: ENSE00001522750 73,998,677- 73,998,473
Bu ekzona denk gelen ilk SNP ID: [ rs425535](https://genome.ucsc.edu/cgi-bin/hgc?hgsid=926904707_JbFKL1aEn7fBwBKxP1BixHmDSPv6&c=chr4&l=73995702&r=73998738&o=73998279&t=73998280&g=dbSnp153Common&i=rs425535)
# DISC1
Fatmanur Sabır
Genbank: [1885](https://www.ncbi.nlm.nih.gov/nuccore/?term=DISC1)
RefSeq: 1404
RefSeq (*H.sapiens*): 122
Bakteride var mı?: Yok
NCBI Gene ID: [27185](https://www.ncbi.nlm.nih.gov/gene/27185)
Kromozomdaki yeri: Chr1: 231,626,790-232,041,272
ENSEMBL id: [ENSG00000162946](https://www.ensembl.org/homo_sapiens/Gene/Summary?g=ENSG00000162946&db=core)
Transkript sayısı: 23
İlk transkript (ENST…): ENST00000439617.8
İlk ekzon (ENSE…) kromozom başlangıç-bitiş: ENSE00000000139 231,626,790-231,626,934
Bu ekzona denk gelen ilk SNP id: [UCSC Link](https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hgtgroup_map_close=0&hgtgroup_genes_close=0&hgtgroup_phenDis_close=0&hgtgroup_rna_close=0&hgtgroup_expression_close=0&hgtgroup_regulation_close=0&hgtgroup_compGeno_close=0&hgtgroup_varRep_close=0&hgtgroup_rep_close=0&hgsid=246030169_C6MjTqDaOH9QuA9a4NDm3hHaW3FX&position=Chr1%3A+231%2C626%2C790-232%2C041%2C272&hgt.positionInput=Chr1%3A+231%2C626%2C790-232%2C041%2C272&goButton=go&hgt.suggestTrack=knownGene&db=hg38&c=chrX&l=15560137&r=15602945&pix=1499&dinkL=2.0&dinkR=2.0) [rs3738399](https://genome-euro.ucsc.edu/cgi-bin/hgc?hgsid=246030169_C6MjTqDaOH9QuA9a4NDm3hHaW3FX&c=chr1&l=231626789&r=232041272&o=231626860&t=231626861&g=dbSnp153Common&i=rs3738399)
# CDC191
Dilan Can
GenBank: [11089](https://www.ncbi.nlm.nih.gov/nuccore/?term=CCDC191)
RefSeq:[955] (https://www.ncbi.nlm.nih.gov/nuccore)
RefSeq (H.sapiens):[14]
Bakteride var mı YOK
NCBI Gene ID: [57577] (https://www.ncbi.nlm.nih.gov/gene/57577)
ENSEMBL ID: [ENSG00000163617] (https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000163617;r=3:113964137-114056594)
Kromozom lokasyonu:Chromosome 3: 113,964,137-114,056,526 reverse strand.
Transkript sayısı:8
İlk transkript (ENST..): [ENST00000295878.8] (https://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000163617;r=3:113964137-114056594;t=ENST00000295878)
İlk ekzon (ENSE..): [ENSE00001241579]
başlangıç-bitiş:114,056,526-114,056,377
Bu ekzona denk gelen ilk SNP ID: [yok] (https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=hg38&lastVirtModeType=default&lastVirtModeExtraState=&virtModeType=default&virtMode=0&nonVirtPosition=&position=chr3%3A114056377%2D114056526&hgsid=245115343_8gXu32wtHfbqAtjftumNaIpFu4jM)
# ATOH7
Çağla Arslanhan
Genbank: [1059] (https://www.ncbi.nlm.nih.gov/nuccore/?term=ATOH7)
RefSeq: 733
RefSeq (H.sapiens): 13
Bakteride var mı?: Yok
NCBI Gene ID: 220202
Kromozomdaki yeri: Chr 10: 68,230,595-68,232,113
ENSEMBL id: [ENSG00000179774] (https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000179774;r=10:68230595-68232113;t=ENST00000373673)
Transkript sayısı: 1
İlk transkript (ENST…): ENST00000373673.5
İlk ekzon (ENSE…) kromozom başlangıç-bitiş: ENSE00001461199 68,232,113 - 68,230,595
Bu ekzona denk gelen ilk SNP id: Yok.
# DMBT1
Hande Maden
Genbank: [1090](https://www.ncbi.nlm.nih.gov/nuccore/?term=DMBT1)
RefSeq: 750
RefSeq (*H.sapiens*): 38
Bakteride var mı?: Yok
NCBI Gene ID: [1755](https://www.ncbi.nlm.nih.gov/gene/1755)
Kromozomdaki yeri: Chromosome 10: 122,560,665-122,643,736
ENSEMBL id: [ENSG00000187908](https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000187908;r=10:122560665-122643736)
Transkript sayısı: 21
İlk transkript (ENST...): ENST00000368909.7
İlk ekzon (ENSE...) kromozom başlangıç-bitiş: ENSE00002691801 122,560,665-122,560,831
Bu ekzona denk gelen ilk SNP id: [rs2981745](https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=hg38&lastVirtModeType=default&lastVirtModeExtraState=&virtModeType=default&virtMode=0&nonVirtPosition=&position=chr10%3A122560665%2D122560831&hgsid=247162890_9NBkPvDaZtkfIEojvxgH9wE80nbT)
# LINC00370
AYŞE YAREN HATİPOĞLU
Genbank: https://www.ncbi.nlm.nih.gov/nuccore/?term=LINC00370
RefSeq:4
RefSeq (*H.sapiens*):4
Bakteride var mı?: yok
NCBI Gene ID: 105370357
Kromozomdaki yeri: Chr 13 NC_000013.11 (109281973..109297687) / Chromosome 13: 109,281,973-109,297,690 forward strand.
ENSEMBL ID: ENSG00000223617 (https://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000223617;r=13:109281973-109297690)
Transkript sayısı: This gene has 2 transcripts
İlk transkript: ENST00000455487.1 (https://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000223617;r=13:109281973-109297690;t=ENST00000455487)
İlk ekzon: ENST00000455487.1
kromozom başlangıç bitiş: 109,281,973 109,282,277
Bu ekzona denk gelen ilk SNP id: var
dbSNP: rs9555578 C/T
Position: chr13:109281974-109281974
Google Drive
Gist
Clipboard
Sign in with Wallet
