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# System prepended metadata

title: Virology topics
tags: [virology]

---

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title: "Virology topics"
tags: virology
---

Please visit [Instructions](/59wD8PaPTt-PVYC-Ge4N0A) page for more details.

**Please have your presentable drafts ready by June 3rd, 2020 1PM.**

:::danger  
Remember, aim is not *"just pick a textbook"*, our aim is to modernize and update our course materials. So,

* **PLEASE DO NOT USE OLD TEXTBOOKS**
  * If you pick an old book you **have to** support it with new materials (review articles or online resources)  
* **PLEASE DO NOT USE OUR OWN TEXT BOOK** which is *Virology: Principles and Applications* by *John Carter and Venetia Saunders (2007)*, because we already have slides from that book!
* **IF YOU'RE FOCUSING ON A PARTICULAR VIRUS** (such as *Merkel Cell Polyoma Virus*, *Chicken Anaemia Virus (CAV)* **PLEASE TRY TO PRESENT IN CONTEXT OF A VIRUS FAMILY (BALTIMORE CLASSES), BIOENGINEERING APPLICATION, ETC.**
* **PLEASE REMEMBER THAT OUR AIM IS PREPARING LECTURE SLIDES, SO 4-5 SLIDES ABOUT A VIRUS WILL NOT BE ENOUGH. PLEASE AIM FOR A FULL LECTURE!**
* Since our lecture is focused on molecular aspects of viruses, from Entry step through exit step, you should also **FOCUS ON MOLECULAR ASPECTS** and refrain from medical aspects.
:::


# List of students and topics

* Alper Yılmaz: retrovirology chapter at "*Virology: Principles and Applications* by John Carter and Venetia Saunders (2007)." ***THIS IS JUST A SAMPLE ENTRY** **PLEASE DO NOT USE OUR OWN TEXTBOOK**
* Bengihan Gündoğan: **Picornaviruses** at "Wang-Shick Ryu - Molecular Virology of Human Pathogenic Viruses-Academic Press (2017).[Bengihan' s Presentation](/cJdv4_xHQ1OFG0ETsPoZQg?view) 
* **Reoviruses** - Fatır KUH - Payne, S. (2017) Viruses. (*with help of Viral Zone web site and web site's pictures*) [Fatır's Presentation](/wOzuWKIvTYmA0NvMOE_chg)
* Özgün Doğa Aşık: **Retroviruses** - “Wang-Shick Ryu - Molecular Virology of Human Pathogenic Viruses-Academic Press (2017)”[Doğa's Presentation](QsXsCUh2QOuPiI7Lp5IycQ)
* Hilal Erkan: **Poxviruses** -  Fenner and White's Medical Virology, 2016. [hilalerkan's presentation](https://hackmd.io/9EfJAu0bRZSfxzhb63U3AQ)
* Simge Sürmen: **Influenza Virus** at "*Virology* by P. Saravanan (2017)." [https://hackmd.io/xR3oOZ_qQISAAp9s6ks9mg](/RPZh7OL2Sg6_bNE70Whj9Q) 
* Yağmur Ersazak: **Human Immunodeficiency Viruses** at "*Virology* by P. Saravanan (2017)." [Yağmur's Presentation](/_Ke0mvTtRuqOyvRhlTAihw)
* Nilay Kurtuluş : **Human Immunodeficiency Viruses(HIV)** - *"Essential Human Virology"* by Jennifer Louten (2016)
* Büşra Ece Günaydın: **Herpesviruses** at *"Principles of Virology,Volume 1 Molecular Biology"*, 4th Edition by S. Jane Flint, Vincent R. Racaniello, Glenn F. Rall, Anna Marie Skalka and Lynn W. Enquist (2015)[Presentation](/ERIJt2thRUiVfrd0wfwAqw)
* Betül Türkel: **Rhabdoviruses** - “Wang-Shick Ryu - Molecular Virology of Human Pathogenic Viruses-Academic Press (2017)” [Betül's Presentation](kSaT0--WTrO1f-Hn6GCdJQ)
* Pelinnur Acay : **Hepatitis C Virus** at *"Essential Human Virology* by Jennifer Louten (2016)." 
* Büşra Zeybek: **Adenoviruses** - "Wang-Shick Ryu - Molecular Virology of Human Pathogenic Viruses-Academic Press (2017)" [presentation](/rG-OP_U1T3uHs5TTSLakIw)
* Sevgisu Eğilmez: **Flaviviruses** at “Wang-Shick Ryu - Molecular Virology of Human Pathogenic Viruses-Academic Press (2017)” https://hackmd.io/ElhNUSoqTWq4uOX1oOou_g
* Muhammed Murat CİNDİLLİ: **Herpesviruses** - "Essential Human Virology by Jennifer Louten (2016)." https://hackmd.io/DIZZ-dfoTMi91-kTWIN9kg
* Şeyma Çağlayan: **Rotaviruses** at "F. Greber - Physical Virology  Virus Structure and Mechanics (2019)"
slide: https://hackmd.io/@bym4502/H1dpxO-9O
* Beyzanur Nükyen: **Parvoviruses** - "Wang-Shick Ryu - Molecular Virology of Human Pathogenic Viruses-Academic Press (2017)" (with help of Halder, S., Ng, R., & Agbandje-McKenna, M. (2012). Parvoviruses: structure and infection. Future Virology, 7(3), 253–278. doi:10.2217/fvl.12.12 )
* Gizem Gören: **Paramyxoviruses** - "Virology by P. Saravanan, 2017." [presentation](/n88bg_tWSNOd20Hyfd2erQ)
* Bekir Can Altındişoğulları: **Hepadnaviruses** - "Recent Advances in Animal Virology by Y. Malik, R. Singh, M. Yadav 2019"
* Nihal Mine KANAR: **Poxviruses** - "Essential Human Virology by Jennifer Louten (2016)." https://hackmd.io/7HcnepZgQG-6V93XTk8lmA
*  Elif Nur Akın: **Polyomaviruses** at "W. S. Ryu, Molecular Virology of Human Pathogenic Viruses. Elsevier Inc., 2016." [Elof's presentation](https://hackmd.io/535UTnS-RXWSLrzKRdn1lg)


* Kubilay Kaan Baytunçer: **Herpesviruses** - “Wang-Shick Ryu - Molecular Virology of Human Pathogenic Viruses-Academic Press (2017)” [presentation](/C66qLtMYQDCzog-njm2rrw)
*  Hüden Turgut: **Influenzaviruses** - "*Essential Human Virology* by Jennifer Louten (2016)."  [Hüden's presentation](/QBx7jR_aSfSTMYzEsfG58A)
*  Hilal ÖZYURT: **Viruses and Cancer** at “*Essential Human Virology* by Jennifer Louten (2016)""
*  Furkan Zahid Tunç: **Rabies Virus** "Ohara S, Sota Y, Sato S, Tsutsui KI, Iijima T. Increased transgene expression level of rabies virus vector for transsynaptic tracing. PLoS One. 2017 Jul 10;12(7):e0180960. doi: 10.1371/journal.pone.0180960. PMID: 28700657; PMCID: PMC5507306." [presentation](https://hackmd.io/aU6f6ZrvQD2n55t4RvHZcA)
"Molecular and Cellular Biology of Viruses Phoebe Lostroh 2019"
*  Muhammed Ömercan Özleyen: **Herpes simplex viruses** -''Temel, klinik ve tanısal Tıbbi Viroloji Prof. DR. Mustafa ALTINDİŞ 2018'' [presentation](/OfHgDmZsR2-STNKnzKJ76w)
*  Yunus GÖKDEMİR: **Retroviruses** -’‘Temel, klinik ve tanısal Tıbbi Viroloji Prof. DR. Mustafa ALTINDAŞ 2018’’
* Furkan Akif Aladağ: **Bacteriophage** at Bacteriophages (2021) David R. Harper
* Dilara SÖĞÜT: **Plant Viruses and Their Differences from Animal Viruses** at ' Molecular plant virology. Volume II, Replication and gene expression - Davies, Jeffrey W (2018)'
* Cihan Atmaca: **The HIV-1 Capsid** at “F. Greber - Physical Virology Virus Structure and Mechanics (2019)”
* Narin Korkmaz:  **Rotaviruses** at "*Virology* by P. Saravanan (2017)."Malik, R. Singh, M. Yadav (2019), pp:351-380” [Narin's Presentation] (https://hackmd.io/E69aCGXVSOGgStY0eB3wSg) 
* İrem Sultan İlçi: **Adeno Associated Virus** at Castle, M. J. (2019). Adeno-Associated Virus Vectors. Methods in Molecular Biology. 

* Mehtap ERDİNÇ : **Payne, S. (2017) Virüsler , Picornaviruses Jawetz Melnick & Adelbergs Medical** [ Mehtap's Presentation](https://https://hackmd.io/fY_oefJgS2yS1KGVa7f4KA )

* Gülbeyaz Aygün : **Tobacco Mosaic Virus** *Virology* by P. Saravanan (2017). [Gülbeyaz's Presentation](https://hackmd.io/DEW2gWvDRW6LymOk_B4G9g?both)

* Miray Bombom : **Methods Used in Virology** "Introduction to Modern Virology" N. J. Dimmock A. J. Easton K. N. Leppard School of Life Sciences,University of Warwick,Seventh Edition,(2016) [Miray's presentation](https://hackmd.io/Y6UZIc0JQzy9A3N2UkLqAQ)
* Tuba Kara :  **Rhabdoviruses** at "*Virology* by P. Saravanan (2017)."
* Berna Hanım Acun: **Bacteriophage** at *"Biology,Technology Therapy"* by David Harper (2018)
* Nisa Tezcan: **Polioviruses**-"Essential Human Virology by Jennifer Louten (2016)." https://hackmd.io/vP93pVB8SH6h49SUKx0YtQ
* Yağmur ilayda Demir : **Giant viruses** at ''N. Brandes and M. Linial, "Giant Viruses—Big Surprises", Viruses, vol. 11, no. 5, p. 404, 2019. Available: 10.3390/v11050404.'' https://hackmd.io/@Dsstv0kARu6g2C5pedcWgg/HkiWZMBqu
* Bahadır Çeki : **Herpesviruses** -“Principles of Molecular Virology by Alan J. Cann - Sixth Edition (2016).”
* Nisanur Çakmakçı: **Retroviruses** "Textbook of Medical Virology by Erik Lycke,Chairman (2014)"
 * İrem Aktaş: **Papillomaviruses** - "Wang-Shick Ryu - Molecular Virology of Human Pathogenic Viruses-Academic Press (2017)"
* Arif Enes Karaca: **Human Herpesviruses**-"Yasushi KawaguchiYasuko MoriHiroshi Kimura-Human Herpesviruses (2018)" [Arif's Presentation](/rGCHSfPNTt64WXmDoDdGXg) 
* NUR CEREN KABAKCI - 1605A014 ***Human papillomavirus (HPV)*** - "Human Papillomaviruse IARC Monographs on the Evaluation of Carcinogenic Risks to Humans, No. 64" https://www.ncbi.nlm.nih.gov/books/NBK424408/
* Emine Tuğçe Aysoy: **MERS-COV VIRUS** -''MERS-CoV: Understanding the Latest Human Coronavirus Threat,  Aasiyah Chafekar and Burtram C. Fielding, Published: 24 February 2018.''
* Elif Hilal AKÇIL: **SARS-COV2 VIRUS** -''Laboratory testing of SARS-CoV, MERS-CoV, and SARS-CoV-2 (2019-nCoV): Current status, challenges, and countermeasures, Ying Yan, Le Chang, Lunan Wang, First published: 17 April 2020.''
* Furkan Kıvanç: **Orthomyxoviruses** ''Recent Advances in Animal Virology by Y. Malik, R. Singh, M. Yadav 2019'' [Click here](https://hackmd.io/40oo-EhNT3-dlZGvOHnXOA) %Topic was deleted I don't know by whom%