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# System prepended metadata

title: BDS status report

---

# BDS status report

1. Z-stack projection
    - Numeric way to evaluate
2. Image preprocessing
    - Works
3. Nuclei segmentation based on DAPI-stain
    - Works, but we have to compare with Jaccard-index
4. Gene Allocation
5. Downstream analysis
    - Leiden algorithm
        - https://leidenalg.readthedocs.io/en/stable/intro.html

- We skip SCIP
- Put everything in 1 module