[目錄] 基因體概觀
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###### tags: `基因體`, `生物資訊`
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## [研究基因體，為何需要雲端平台？](/2ABKMIFsQRO2qEJglamJ4w)
雲端平台介紹
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- ## Illumina
- [七大類產品](/u5v8nIZ5RGmJVOIp5iJCZQ)
- [MyIllumina](/8QZvMaPGTyCuIW1i9-07Ug)
- [BaseSpace Sequence Hub (BSSH)](/5u-ROrrXTmCZeUK5sPYdFA)
- [BaseSpace Variant Interpreter (BSVI)](/sR3e8C2dQPe8tMefXH9HIA)
- [BaseSpace Clarity LIMS](/5E2q6pEZQoOcsZsvQBQ0ow)
- [BaseSpace 系統架構圖](/LkaYy1tHT2yUgatZ1EndXw)
- ## Galaxy
- 平台
- [ESC4000](http://10.78.26.241:9696/)[target=_blank]
- [UseGalaxy.org](https://usegalaxy.org/)[target=_blank]
- [Galaxy 入門](/2uwnUsDkQ7uF9KfB8QTLQg)
- [自訂分析工具](/XQjPlWFNRVu3xMzXb9RVSQ)
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⓪ 定序流程
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- [Illumina / 樣本製備](/zaOegRK4SYG-loAtMtvitg)
- [Illumina / 試劑盒](/JY36wfZgSGur7j76h3v7WA)
- [Illumina / 定序原理](/9fsiG_EUQDyIN7dq6mboGg)
① 一級分析
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- BroadInstitute
- [1. Sample Preparation](https://www.broadinstitute.org/files/shared/illuminavids/SamplePrepSlides.pdf)
- [2. Cluster Generation](https://www.broadinstitute.org/files/shared/illuminavids/clusterGenSlides.pdf)
- [3. Sequencing](https://www.broadinstitute.org/files/shared/illuminavids/sequencingSlides.pdf)
- [4. Data Analysis](https://www.broadinstitute.org/files/shared/illuminavids/dataSlides.pdf)
② 二級分析
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- [台大基因定序案](/XtsPHvS1RC25IlS6K2AcNA)
- [GTAK](/nMO2uGLeSsK4QCvpS1KMIg)
- [ANNOVAR](/VdHP3H1ARIiZkSrG-MXvDQ)
- [ANNOVAR for susScr11](/IDdLyGGCRNypPuAyJTxlCA)
- [ANNOVAR for mm9](/LFnFczcZTAWyya8IM1_KFg)
③ 三級分析
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ⓐ 附錄
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- [中英術語對照](https://github.com/tsungjung411/language-study/blob/master/en/terms/%E7%94%9F%E7%89%A9%E8%B3%87%E8%A8%8A.md) [target=_blank]
- ### [檔案格式介紹](/ZGY6D2MBTYuCrYePsYquXA)
- [VCF Format](/6rATKTvURVSKia8K_9kBeQ)
- [豬隻小資料](/uYwoH4XfTUuFLdrluGdWkQ)
- [D15780 (小資料)](/JhM5KGz7Q9yIzZ6_eXQxDA)
- ### 基因資料庫
- [dbSNP](/K43_k2iNTGi0i0xUlkLC0A)
- [UCSC](/3dTx6dqhTBOKbg8-RsR3PA)
- [UCSC db](/JA-_6-QqSWqDSqL8aMRmfw)
- [電腦選豬仔 (超級賽亞豬)](/xMMX0fh_RxWtYJbGtbBcOw)
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生物資訊入門
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- [全基因體定序(WGS)](/qmzwm4idRyWROeeboqpfSw)
- [循序漸進學習資料](/N9ITKNWlRaStb9tVp2yuNw)
- 特別篇
- [科普知識](/W8jsCuM4QwWlNHSA20M_4A)
- [武漢肺炎](/jLcTIiNrSMi3fZ5mBgcsBQ)
常見生技公司介紹
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- [基龍米克斯生物科技](https://www.genomics.com.tw/) [target=_blank]
- [有勁生物科技](http://www.yourgene.com.tw/)
- [均泰生物科技](http://www.gtbiotech.com.tw/)
基因專題
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- [GENE Online](https://geneonline.news/) [target=_blank]
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