Janssen density guided simulation
===

###### tags: `Meeting`

- **Location:** https://kth-se.zoom.us/j/67152403814
- **Date:** 2022-02-16 10:00-11:50

# Read and extend the agenda

- `5min`

# How many resources do you have for this collaboration

- `5min`[name=Christian, Nandan, Linnea, Erik]
- Chrsitian 3 weeks full time
- Nandan : transitioning to full time

# The *musts* in this project

- `5min` [name=Christian]
- Reporting: put up slides
- Final report

# What has already happened

- `10min` [name=Christian, Nandan]
- Nandan AWS set up, running simulations
Question: - three options: what are the differences

# Key ideas in the proposal

- `30min` [name=Christian]

## WP1
## WP2

# What tools do we already have, what methods did we already apply?

- `30min` [name=Christian, Linnea, Nandan]
- `mdpeditor`
-

# How do we share project data?

- `10min` [name=Christian, Nandan]

- Share and develop workflows "publicly", but don't advertise

# How do we define and share workflows?

- `15min`[name=Christian]

Currently
- Makefiles
- Scripts
- Jupyter notebooks
- Tutorials

A pledge to use
- [Snakemake](https://snakemake.github.io/)
- [CWL](https://www.commonwl.org/user_guide/)

# Future issues

# How many resources do you want to spend on this collaboration
- `10min`[name=Christian, Nandan, Linnea, Erik]