Metagenomic-analysis Pipeline Error with `conda install` command ``` (MetagenomicAnalysis) parallels@ubuntu-linux-20-04-desktop:~/software/metagenomic-analysis$ conda install -y \ > snakemake ruamel.yaml biopython \ > 'r=4.1' r-ggplot2 r-optparse r-scales \ ``` This yields the following error, due to conflicts: ``` Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source. Collecting package metadata (repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. Solving environment: | Found conflicts! Looking for incompatible packages. This can take several minutes. Press CTRL-C to abort. failed UnsatisfiableError: The following specifications were found to be incompatible with each other: Output in format: Requested package -> Available versions Package krb5 conflicts for: r=4.1 -> r-base[version='>=4.1,<4.2.0a0'] -> krb5[version='>=1.19.1,<1.20.0a0'] r-ggplot2 -> r-base[version='>=4.0,<4.1.0a0'] -> krb5[version='>=1.16.4,<1.17.0a0|>=1.17.1,<1.18.0a0|>=1.19.1,<1.20.0a0'] r-scales -> r-base[version='>=4.0,<4.1.0a0'] -> krb5[version='>=1.16.4,<1.17.0a0|>=1.17.1,<1.18.0a0|>=1.19.1,<1.20.0a0'] r-optparse -> r-base[version='>=4.0,<4.1.0a0'] -> krb5[version='>=1.16.4,<1.17.0a0|>=1.17.1,<1.18.0a0|>=1.19.1,<1.20.0a0'] Package xz conflicts for: biopython -> python[version='>=3.8,<3.9.0a0'] -> xz[version='>=5.2.4,<5.3.0a0|>=5.2.5,<5.3.0a0'] r-scales -> r-base[version='>=4.0,<4.1.0a0'] -> xz[version='>=5.2.4,<5.3.0a0|>=5.2.5,<5.3.0a0'] r=4.1 -> r-base[version='>=4.1,<4.2.0a0'] -> xz[version='>=5.2.5,<5.3.0a0'] r-ggplot2 -> r-base[version='>=4.0,<4.1.0a0'] -> xz[version='>=5.2.4,<5.3.0a0|>=5.2.5,<5.3.0a0'] r-optparse -> r-base[version='>=4.0,<4.1.0a0'] -> xz[version='>=5.2.4,<5.3.0a0|>=5.2.5,<5.3.0a0'] ruamel.yaml -> python[version='>=3.9,<3.10.0a0'] -> xz[version='>=5.2.4,<5.3.0a0|>=5.2.5,<5.3.0a0'] python=3.7 -> xz[version='>=5.2.4,<5.3.0a0|>=5.2.5,<5.3.0a0'] Package libblas conflicts for: biopython -> numpy -> libblas[version='>=3.8.0,<4.0a0'] r-ggplot2 -> r-base[version='>=4.0,<4.1.0a0'] -> libblas[version='>=3.8.0,<4.0a0'] r-optparse -> r-base[version='>=4.0,<4.1.0a0'] -> libblas[version='>=3.8.0,<4.0a0'] r=4.1 -> r-base[version='>=4.1,<4.2.0a0'] -> libblas[version='>=3.8.0,<4.0a0'] r-scales -> r-base[version='>=4.0,<4.1.0a0'] -> libblas[version='>=3.8.0,<4.0a0'] Package pypy3.6 conflicts for: biopython -> pypy3.6[version='>=7.3.2|>=7.3.3'] ruamel.yaml -> python[version='>=3.6,<3.7.0a0'] -> pypy3.6[version='7.3.*|7.3.0.*|7.3.1.*|7.3.2.*|7.3.3.*'] snakemake -> google-crc32c -> pypy3.6[version='>=7.3.1|>=7.3.2|>=7.3.3'] biopython -> numpy -> pypy3.6[version='7.3.*|7.3.0.*|7.3.1.*|7.3.2.*|7.3.3.*|>=7.3.1'] ruamel.yaml -> pypy3.6[version='>=7.3.1|>=7.3.2|>=7.3.3'] Package numpy conflicts for: snakemake -> networkx[version='>=2.0'] -> numpy[version='>=1.16.3,<2.0a0|>=1.16.4,<2.0a0|>=1.16.5,<2.0a0|>=1.16.6,<2.0a0|>=1.17.5,<2.0a0|>=1.19|>=1.19.5,<2.0a0|>=1.19.4,<2.0a0|>=1.18.5,<2.0a0|>=1.19.2,<2.0a0'] biopython -> numpy Package wheel conflicts for: python=3.7 -> pip -> wheel snakemake -> dropbox[version='>=7.2.1'] -> wheel Package ld_impl_linux-aarch64 conflicts for: ruamel.yaml -> python[version='>=3.9,<3.10.0a0'] -> ld_impl_linux-aarch64[version='>=2.34|>=2.36.1'] biopython -> python[version='>=3.8,<3.9.0a0'] -> ld_impl_linux-aarch64[version='>=2.34|>=2.36.1'] python=3.7 -> ld_impl_linux-aarch64[version='>=2.34'] python=3.7 -> binutils_impl_linux-aarch64 -> ld_impl_linux-aarch64[version='2.33.1|2.34|2.34|2.34|2.34|2.34|2.34|2.35|2.35.1|2.35.1|2.35.1|2.35.1|2.36.1',build='h326052a_8|h326052a_8|h281f86e_8|h281f86e_9|h36823c2_0|h36823c2_1|h02ad14f_1|h02ad14f_2|h02ad14f_1|h02ad14f_0|h71b2515_9|h326052a_7|h326052a_6|h326052a_5'] Package libstdcxx-ng conflicts for: ruamel.yaml -> python[version='>=3.9,<3.10.0a0'] -> libstdcxx-ng[version='>=7.3.0|>=7.5.0|>=9.3.0'] r-ggplot2 -> r-base[version='>=4.0,<4.1.0a0'] -> libstdcxx-ng[version='>=7.3.0|>=7.5.0|>=9.3.0'] python=3.7 -> libstdcxx-ng[version='>=7.3.0|>=7.5.0|>=9.3.0'] r-optparse -> r-base[version='>=4.0,<4.1.0a0'] -> libstdcxx-ng[version='>=7.3.0|>=7.5.0|>=9.3.0'] biopython -> python[version='>=3.8,<3.9.0a0'] -> libstdcxx-ng[version='>=7.3.0|>=7.5.0|>=9.3.0'] r-scales -> r-base[version='>=4.0,<4.1.0a0'] -> libstdcxx-ng[version='>=7.3.0|>=7.5.0|>=9.3.0'] r=4.1 -> r-base[version='>=4.1,<4.2.0a0'] -> libstdcxx-ng[version='>=9.3.0'] snakemake -> pandas -> libstdcxx-ng[version='>=7.3.0|>=7.5.0|>=9.3.0'] Package setuptools conflicts for: ruamel.yaml -> setuptools snakemake -> dropbox[version='>=7.2.1'] -> setuptools python=3.7 -> pip -> setuptools Package r-scales conflicts for: r-ggplot2 -> r-scales[version='>=0.5.0'] r-scales Package libgfortran4 conflicts for: r-optparse -> r-base[version='>=3.6,<3.7.0a0'] -> libgfortran4[version='>=7.5.0'] r-ggplot2 -> r-base[version='>=3.6,<3.7.0a0'] -> libgfortran4[version='>=7.5.0'] r-scales -> r-base[version='>=3.6,<3.7.0a0'] -> libgfortran4[version='>=7.5.0'] Package tzdata conflicts for: ruamel.yaml -> python[version='>=3.9,<3.10.0a0'] -> tzdata biopython -> python[version='>=3.9,<3.10.0a0'] -> tzdata Package r-base conflicts for: r=4.1 -> r-base[version='>=4.1,<4.2.0a0'] r=4.1 -> r-recommended -> r-base[version='>=3.5,<3.6.0a0|>=3.6,<3.7.0a0|>=4.0,<4.1.0a0|>=3.5.1,<3.5.2.0a0'] Package r-mass conflicts for: r=4.1 -> r-recommended -> r-mass r-ggplot2 -> r-mass ```