---
# System prepended metadata

title: '2022-02-01'
tags: [Tuesday]

---

---
tags: Tuesday
---

# 2022-02-01

Attending: Will, Petr, JM, June, Seb, David, Kevin, Jason, Frances, Khaled, David Stirling, Chris, Andreas, Wilma, Melissa, Muhanad, Erin, Mina, Josh, 

Start: 2:00 pm UK

## Accepting minutes from [last meeting](https://github.com/ome/meeting-minutes)

## Project Status

(2-3 minutes each)

- IDR:
  - next release: 2 new studies
  - idr0127 (timelapse bacteria), idr0123 (FISH-omics)
  - Khaled: search - deployed for testing

- NGFF
    - OME-NGFF 0.4
        - Good community calls last week
        - Final spec updates (transformations, clarifications)
        - JSON schemas / samples
        - reading/writing implementations (Python, Java)
    - Hackathon (Zulip, image.sc gather.town)
      - squid-py compatibility

- Releases
  - Jenkins update  See [summary](https://github.com/ome/devspace/issues/188) 
    - Upgrade prior to moving to python 3.8, CentOS7


- Glencoe
  - Updating Gradle, Java LTS versions 17 etc 

- Community
  - Global bioimaging workshop last week
    - wide range of participants - global
    - enthusistic chat
    - OMERO and IDR workshops - went well
  - Next week: Karolinska Institute
  - OME meeting

## AOB

(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)

## Main Topic

(20-25 minutes plus 15 minutes questions max)
Glencoe software:
  - deploy with microservices
  - Use shared storage for Zarr data in well-defined format (Fileset IDs etc.)
    - Data duplicated
    - Different pyramid structure from raw data
  - Make OMERO.server aware of shared storage
    - run bioformats2raw
    - import OME.xml - get Image ID
    - tell microservice Image ID and path/to/zarr

  - Previous investigation from Simon https://gitlab.com/openmicroscopy/incubator/bioformats-urlreader
