--- tags: Tuesday --- # 2020-11-24 ## Attending: - Will, Petr, Josh, Jason, Simon, Wilma, David, Erin, Chris, Melissa, Kevin, Emil, Start: 2:00 pm UK ## Accepting minutes from [<u>last meeting</u>](https://github.com/ome/meeting-minutes) ## Project Status (2-3 minutes each) - IDR - Jason: several interesting new studies coming in - e.g. In-situ gene sequencing - NGFF - ZarrReader - branches: not PRs yet - https://github.com/dgault/ZarrReader/tree/prototype - https://github.com/dgault/jzarr/tree/ome-zarr - Josh: testing locally. jzarr hard - Looking for Java support for I2K next week - HCS: solidifying & some workflow additions - To propose or not to propose - Few outstanding ome-zarr-py / omero-cli-py PRs - [New spec home](https://ngff.openmicroscopy.org/latest) - New home of the spec - Some migration still needed, along with redirects - Feedback, comments concerns welcome - I2K update - Working through the program - Call with Tischi this morning - Time-slot & attendees - Intro, demos Java/Python/JavaScript (2 hours) - Then workshops in breakout rooms - Seb: If you're going to talk about HCS, need refs/spec solid. - Josh: would be good to merge Draga's contribution: code and spec - Jason: 4 hours is long. Good to have break at 2 hours - Microscopy Australia - Interesting in running an NGFF demonstrator in the new year. (Conceivably EM) - Releases - Seb: Contributions from Glencoe going in - Tabular Data with ROIs - Good to see use cases/workflows - Josh: Python 3.9 now supported (needed for Mac Big Sur). Packages on conda - SA - Glencoe - Chris - see above - Interested to hear David's experience of jzarr - Community - OMERO workshop on Monday and Wednesday I2K 4 hours. - NGFF workshops x2 on Wednesday - McGill workshop 1hr - starting after this meeting - Seb: promoting on the website? Petr: will add retroactively. - JRS: good conversation with CMU-4DN. Dec 3rd-5th will be a consortium wide introduction. Starting data conversations (where, what) - Josh: Can see a path forward re: spatial indexes of n-d arrays - JRS: writing project spec for Sanger work ## AOB (5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled) ## Main Topic (20-25 minutes plus 15 minutes questions max)