--- tags: NGFF, community-call --- # NGFF Community Call 2020-12-02 (with I2K) * See: [Connection information](https://forum.image.sc/t/connection-information-for-next-gen-call-on-dec-2nd/46007) and [previous call](https://hackmd.io/_sftykiGR9mSyUan3l1WmA?view) * No recording ## Session 1 (1200 UTC) - Attending: - U. Dundee: Josh Moore, David Gault, Seb Besson - EMBL: Christian Tischer - Janelia: Blair Rosetti, Mark Kittisopikul - JAX: Dave Mellert, Eric Perlman, Erick Ratamero - RIKEN: Ken Ho * ImariWriter (Mark) - checked performance and could reproduce benchmarks - looking into the use of the optimized IO routines as a possible new backend for the N5 API - Tischi: why IMS? good for middlerange data - parallel codec to go along with HDF5s optimized IO routines - Mark: looking to add as another N5 API backend * Remote downsampling - Keller is/wwas worried about subresolutions - split downsampled resolutions from the original volume - bidirectionality is an issue; can put the slow version on something other than S3 * Compression - wavelets as an option for partial reads compared to lossy/jpeg - jpeg in numcodecs - zarr_implementations for testing * S3 in general - remote viewing - permissions as a train-wreck. wild-west compared to POSIX. * bioformats2raw - Eric: interested in bf2raw with n5-spark directly to s3 * Rechunker - https://github.com/pangeo-data/rechunker * metadata - see https://forum.image.sc/t/metadata-for-ome-next-generation-file-format-ngff/44373/25 ## Session 2 (2000 UTC) * Largely private chat between Josh & Nick