---
tags: Tuesday
---

# 2024-07-30

Attending:Petr, Dom, Frances, Andreas, Melissa, Khaled, Jason, Josh, David, Kyle, Erin, Chris

Start: 2:00 pm UK

## Accepting minutes from [last meeting](https://hackmd.io/team/ome?nav=overview)

## Project Status

(2-3 minutes each)

- IDR
- Frances: what IDR would do for NGFF challenge. 3 studies identified for challenge,
- idr0090: compound screen, atm v2, looking into converting into v3
- idr0157: plant phenotypic study, not converted to zarr yet, 14 organisms
- idr0044: light-sheet data, chunking and sharding, not converted to zarr yet
- Frances: Dom has a pilot for testing the conversions
- Josh:
- idr0044 has been converted (question is the quality of this conversion)
- Frances: only one image from idr0044 was converted == not converted as a whole
- pilot dedicated for the work is slow

- OMERO
- Andreas: released OMERO.web, J-M merged everything what is needed

- Bio-Formats
- following the OMERO release including the latest B-F (fix for idr0043)
- zarr java integration tests
- Chris: 7.3.1 B-F behaviour changed when things are missing. Files that failed before will not fail now.
- Josh: should 7.3.1 be rather 7.4.0 ? Chris: lets see.
- Melissa, Chris: to be decided how big the impact of the change is.

- NGFF
- RoCrate
- Rust community contribution: converter. Zarr v3 codec specification is hard to implement.
- Transforms specification - work in progress.

- GerBI

- Glencoe
- releases

- Community
- Jason: progress on paper with UGM colleagues
- Jason: BiNA conversations about OME meetings

## AOB

(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)

## Main Topic

(20-25 minutes plus 15 minutes questions max)