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# System prepended metadata

title: IDR-NGFF 2020-W50
tags: [NGFF]

---

---
tags: NGFF
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# IDR-NGFF 2020-W50

## 2020-12-11

* J-m: galaxy meeting had slide of accessing data in OMERO. Then one working group was talking about object storage. Reported on Zarr. Perhaps after Q1 they will access and then it's time to discuss.
  - cf. Nathan (s3) and Jeremy (images)

## 2020-12-10
* Simon: opened PRs against omero-cli-zarr. Dom to look.
* Seb: clarification re: idr0001. apparently it's missing half the data. 2 fields x 6 acquisitions.
* Josh: not around next week. May not need NGFF call? (Perhaps an action call?)
* J-m: need to go back to the artifactory work.

## 2020-12-09
* Simon: idr0099 converted to companion files. one works; the rest are all black. Seb: can look when time allows. http://localhost:10080/webclient/?show=project-1501
  - Simon: want to downsample in Z as well
  - Seb: spec change
* Seb: tested bioformats2raw HCS work. Looking great.
  - Melissa pointed out several examples that we haven't focused on yet. e.g. missing rows/cols; not using letter for the name. Not yet clear or complete.

## 2020-12-08
* General [GH Actions](https://docs.google.com/spreadsheets/d/1Lczm5L1YAtWmGHAOaDVdJr9IIJoh5YW7UbtSxWgSCE0/edit#gid=0) discussion
* Simon: tried converting IDR data. after memory issue, ran into too many files. Problem in PatternFileReader? Try companion file.

## 2020-12-07

* Josh: releasing ome-zarr-py and focusing on EOSS
* David: back to 6.6 before more on ZarrReader
* Rest: N/A