--- tags: Tuesday --- # 2021-02-23 Attending: Will, Seb, Dom, June, Jason, Jean-Marie, Josh, Petr, Wilma, Frances, Melissa, Andreas, Kevin, Chris, Erin, Emil Start: 2:00 pm UK ## Accepting minutes from [<u>last meeting</u>](https://github.com/ome/meeting-minutes) ## Project Status (2-3 minutes each) - IDR - BF issue with idr0093 - Melissa has fix, being tested. Hopefully in next release - Next release also includes with idr0090 (malaria) and idr0099 (beetle) - NGFF - Benchmark status (3D, AWS, snapshots) - 3D still generating data - 3TB imaris to zarr to OME-TIFF - 1024 cube, 500 time points - Merging branches so we don't need to use snapshots in prep for AWS - Community calls & the [roadmap](https://github.com/ome/ngff/projects/1) - Well attended this morning - Some interest in driving spec - collections, scales, polygons etc. - Separate HCS spec from core etc. - Zarr/N5 Java edition tomorrow evening (8 CET) - Include Java community members - Discuss v3 implementation in Java - Paper - JRS - Methods for Benchmark, need a couple of paragraphs - Updates to [draft text](https://docs.google.com/document/d/14u-wBHRupQItvA-2CSgYGWxxN1rM5L2f__cZRk-mYFQ/edit) - recently rewritten, feedback welcome - Releases - insight 5.5.16 (out). dmg built by GHA to be looked at - iviewer 0.10.2 (out) - figure: one more PR to rebase then merge - going over conda packages - web: work-in-progress - SA: N/A - Glencoe - focus on ngff etc. - also masks - metadata in OME-Zarr, balance with domain-specific metadata - HCS - implicit grouping good, but non-python API can be tricky. Java: groups need creating manually - Josh: jzarr might be doing this wrong. Might be worth raising - labels working OK with current spec (nested under image) - close to telling users to write their data, masks etc into OME-Zarr - - Community - [forum: Prepping and including ROI masks](https://forum.image.sc/t/prepping-and-including-roi-masks/48750/9) - Will to check iviewer - [OME 2021 Meeting?](https://forum.image.sc/t/ome-community-meeting-2021/49112) - Jason - covid status not changing much - Do we want to have a single meeting? Remote etc more flexible - JM: pick a day, let users choose schedule? - Josh: less time over more days is less stressful - TBD: pre-recorded videos, # of days, continugous, big topics, exclude NGFF since it's bimonthly - Jason will reply to forum "We're discussing it" - Sanger and 4DN projects - challenge to manage communication channels ## AOB (5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled) ## Main Topic (20-25 minutes plus 15 minutes questions max)