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tags: 4DN
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# 4DN Symposium 16.Nov.2020

- Yang Zhang, project manager. Contact point, incl. data submissions, outreach, connecting to NIH & 4DN committees
- Andy Belmont & Frank Alber (U54 center)
- In phase 1, two researchers met up and got married ...
- Huge need for controlled vocabularies
- ASB lab developed several new genomic mappig techniques in previous project in particular around proximity of specific loci
- FA lab Data Driven and deconvolution approaches for modeling nuclear 3D structure
- More opps for controlled vocabularies...
- fingerprints of features at each chromosome location (See slide)
- Jian Ma
- Beyond A/B compartiments. More fine-grained.
- Xiaopeng Zhu: next-gen viz for exploring 4dN
- Andys lab
- ...
- Omid G.
- D. Gilbert
- See one graph aligned with sequence of images.
- Ting Wu
- Antonios (whole genome in super resolution): 8x - 40x speed up
- Sarah Aufmkolk: volumes/**surfaces** (i.e. beyond stick-and-ball)
- Nicola Neretti
- Jeremy H.: delivery for year-1
- Audrey D.: shape alphabet
- Susanne (Allen)
- integrated cell. allencell.org
- Nucleas: Chris Frick, Kim Metzler, Graham, long list (incl. Jamie)
- Tom Misteli
- Gianluca: HTP cellular pathways
- Elizabeth: variability
- Form own groups (even without PI)
- on slack? Yes.
- Yang:
- Post-hoc
- vocabulary: https://data.4dnucleome.org/resources/experimental-resources/experiment-types