2025-04-01

Attending: Will, Petr, Dom, JM, Josh, Frances, Chris, Khaled, Andreas, Erin, Kyle, Kevin, David, Seb,

Start: 2:00 pm UK

Accepting minutes from last meeting

Project Status

(2-3 minutes each)

  • IDR Frances:

    • EBI microscopy course this week
    • Helping OME-Zarr conversions from submitters
    • IDR to BIA submissions via Globus - testing new workflow for new non-Zarr submissions
  • OMERO

    • OMERO 5.6.15 release - planned for tomorrow
    • OMERO.web - looking at the next release
    • Numpy 2 support
      • OME CI upgraded to use Python 3.11
      • JM: will do a final test in collab notebook
  • Bio-Formats Seb:

  • NGFF Josh:

    • NGFF weekly dev update . Hope to get others to contribute. What frequency? What updates from OME team?
      • FLIM discussions with companies. Submit sample data.
      • 0.6.dev.1 new branch for RFC-5
    • Viewer status discussions in TechDev meetings.
      • Planning new React viewer built on viv
    • geo.json to spatialdata
    • Will: ome-zarr-py Zarr v3 is now green
  • GerBI Josh:

    • TIM last week. Lots of new data.
  • Glencoe Chris:

  • Community Petr:

    • EBI-EMBL course this week
    • Discussed workshops at OME2025 (Petr, JM, Will, Jason attending)

AOB

(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)

Main Topic

(20-25 minutes plus 15 minutes questions max)