--- tags: Tuesday --- # 2021-09-21 Attending: Will, Chris, Seb, Khaled, Jean-Marie, Petr, Dom, Josh, Muhanad, Jason, Andreas, Frances, Melissa, Wilma, Kevin, Erin, Emil Start: 2:00 pm UK ## Accepting minutes from [last meeting](https://github.com/ome/meeting-minutes) ## Project Status (2-3 minutes each) - IDR - prod101 released today: idr0101 (in-situ sequencing) & idr0116 (EM) - Over 100 million 2D planes now in IDR - Fixed links to idr-analysis - Jason: seeing more sequencing in imaging - NGFF * OME-Zarr/Python: - Labels - napari changed format for labels.properties - Need more regular testing - Dom: export of multiple 'collections' of images - performance issues * OME-Zarr/Java: - JSON parsing: inconsistent handling of doubles - Spec updates: ZarrReader v0.2 & v0.3 support - URLs in test suite - issues loading remote s3 URLs - Bio-formats doesn't like to open directories - Must be named .zarr - ngff paper nominally accepted - reduced word count - Releases - Glencoe - ngff: jpeg2000 codec released for zarr - axes in napari - channel needs to be last dimension for interleaved rgb - isyntax-to-raw used for testing - Melissa: new file formats support coming (Dicom) - Community - Virtual workshop Turku mid-november ## AOB - Geoff's email re: working in office (5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled) ## Main Topic (20-25 minutes plus 15 minutes questions max) * Khaled: demo of searching app * Searching Key-Value pairs * Support AND OR NOT * Storing KVPs in hdf5 file * Async search (Celery + Redis) with task ID * Caching of query and results * Large features to keep in mind regarding design: - invalidating cache(s) - permissions