---
# System prepended metadata

title: '2022-10-04'
tags: [Tuesday]

---

---
tags: Tuesday
---

# 2022-10-04

Attending: Will, Petr, June, J-M, Josh, Khaled, Seb, Andreas, Kevin, David, Wilma, Chris, David, Jason, Melissa, Kyle, Mina, Muhanad, 

Start: 2:00 pm UK

## Accepting minutes from [last meeting](https://github.com/ome/meeting-minutes)

## Project Status

(2-3 minutes each)

- IDR (Seb)
  - Search released :tada:  releasing rolling improvements
      - not announced yet - still testing performance etc.
      - only accessible from idr.openmicroscopy.org (no change in webclient)
      - notebooks updated, e.g. HPA searches now working e.g. https://github.com/IDR/idr-notebooks/blob/master/humanmine.ipynb
      - Next: remove mapr searches
      - Feedback to https://github.com/IDR/idr-gallery/issues/ 
  - Seb: storage
    - FIRE "not fit for purpose" for IDR
    - s3 might be viable alternative... needs testing
  - JM: idr0125 accepted but not imported etc in time for their publication - placeholder page

- OMERO
    - Josh: community trying Docker deploys a lot - needing help.  

- Bio-Formats
    - Jetraw PR to add support. Not quite ready yet. Push release back a bit. Decision next week
        - CLA needed
    - PR review - assigned to milestones, reviewers etc.

- NGFF (Josh)
  - IDR-related spec features
      - How to include zip
      - Link to multiple storage locations, e.g. try to load from "fast" storage, if it fails, link from other
  - https://linkml.io/  another platform for modeling (and generating json-schema, json-ld, etc.)
      - Josh: want to try with NGFF data, OME-OWL etc
  - Java/Scala: v3 plus an async requirement - NetCDF, jzarr
      - Fiji, Webknosses, OME, etc interested
  - https://forum.image.sc/t/ome-ngff-community-call-transforms-and-tables/71792/8 tomorrow

- GerBI

- Glencoe (Chris):
    - security review, customer deployments
    - RHEL9 - interest in jumping 7 -> 9
        - new SSL versions etc
        - JM: generating wheels? Chris: yes
    - Customers want only dependencies with 5 year support. E.g. Java 11 close to limit
        - Josh: postgres? testing 14
    - NGFF work on aws and authentication
    - Seb: need to ask UoD whether systems will be updated to RHEL 8 or Ubuntu etc?

- Community

## AOB

(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)

## Main Topic

(20-25 minutes plus 15 minutes questions max)
