# Week 16: Group 1 ###### tags: `OLS-2` `cohort calls` `project-leads` :earth_asia: Cohort call --- # **Week 16: OLS Graduations Group 1** **Syllabus** :[ https://openlifesci.org/ols-2/schedule/#week-16](https://openlifesci.org/ols-2/schedule/#week-16) **Looking for other Graduation notes? See here:** https://hackmd.io/@ols-2/week-16 * Slot 2: 16 December, Wednesday - 14:00 - 15:00 UTC * [Notes](https://hackmd.io/@ols-2/week-16-gr2) * [In your timezone](https://arewemeetingyet.com/London/2020-12-16/14:00/week-16-ols-2-grad2) * Slot 3: 17 December, Thursday - 17:30 - 18:30 UTC * [Notes](https://hackmd.io/@ols-2/week-16-gr3) * [In your timezone](https://arewemeetingyet.com/London/2020-12-17/17:30/week-16-ols-2-grad3) ### **Open Life Science is inviting you to a scheduled Zoom meeting.** Topic: OLS-2 Gradations Group 1 Time: Dec 15, 2020 09:00 AM London - Youtube stream: [https://www.youtube.com/watch?v=IGyoiFnCvis](https://www.youtube.com/watch?v=IGyoiFnCvis) - Otter Transcription: [https://otter.ai/u/A2eNaLDzs53xWbjOvamHyKwlk2A](https://otter.ai/u/A2eNaLDzs53xWbjOvamHyKwlk2A) ## **Register by adding your name below** ### **Project leads** _Name / Project / social handles (twitter, GitHub, etc.) /_[ _emoji mood _](https://emojipedia.org/) 1. Muhammet Celik and Gokcen Sahin / Meta-Pipeline / tw: @dnaencoder 2. Bailey Harrington / Chronic Learning / gh: @baileythegreen, tw @ChronicLearning, @baileythegreen 3. Camila, David, Kevin, Sam / TuringDataStories / t: @TuringDStories / g-repo: alan-turing-institute/TuringDataStories 4. Kate Simpson / Retrofit POE/ t: @Dr_KateSimpson, g: Kate_Simpson 5. Hilyatuz Zahroh / APBioNetTalks / t: hilyatuz_zahroh, gh:@hzahroh, gh:@APBioNet ### **Guests, colleagues, and friends of OLS** _Name / Project / social handles (twitter, GitHub, etc.) /_[ _emoji mood _](https://emojipedia.org/)_ * Yo Yehudi / Open Life Science * Louise Bowler / The Alan Turing Institute / t: @louise_a_bowler / gh: @LouiseABowler * Bérénice Batut / OLS / @bebatut / 🥰 * Mallory Freeberg / EMBL-EBI / tw/gh: @MalloryFreeberg / <(^.^<) <(^.^)> (>^.^)> * Sarah Gibson / The Alan Turing Institute / t: @drsarahlgibson, gh: @sgibson91 / 😁 * Kate Simpson / Open retrofit evaluation / t: @Dr_KateSimpson, g: @KateSimpson / 🦌 * Melissa Burke/ Australian BioCommons/ Mentor for Chronic Learning project/ t: @burkemlou * Kirstie Whitaker / The Turing Way or Alan Turing Institute / t: @kirstie_j G: @KirstieJane / 🥰 * Jez Cope / The British Library / @jezcope / 🎄 * Callum Mole / The Alan Turing Institute / gh: @callummole * Juulia Ahvensalmi / St George’s, University of London / t: @cheryfayre * Muhammet Celik / OLS mentee - Bezmialem Vakif University / t: dnaencoder * Laura Carter / University of Essex / t: @LauraC_rter * Piv Gopalasingam / European bioinformatics institute / t:@cascade21 / gh:@PivG * Jack Roberts / The Alan Turing Institute / gh: @jack89roberts * Camila Rangel Smith / Turing Data Stories / t: @camilarangels / * Bailey Harrington / Chronic Learning / t: @baileythegreen, @ChronicLearning, gh: @baileythegreen * Arielle Bennett (she/her) / The Alan Turing Institute / t: @biotechchat / ✨✨✨ * Esther Plomp (she/her) / Delft University of technology / t: @PhDToothFAIRy / gh: EstherPlomp * Eva Herbst / Finite Element Zurich / t: @EvaCHerbst g: @evaherbst :wave: Welcome --- **Hosts**: Bérénice, Malvika, Yo, Emmy * Please note that this call will be recorded * The video will be available on the[ YouTube channel](https://www.youtube.com/openlifesci) in the next days * Turn on your webcam if you don’t mind sharing your face (or off if you do!) **YOUTUBE Stream:** [https://www.youtube.com/watch?v=IGyoiFnCvis](https://www.youtube.com/watch?v=IGyoiFnCvis) ## 🖥 Project Presentations [HOST NAME] (⏰ 3 min) Presenters will add their info in the following format 1. Meta-Pipeline // Muhammet Celik // Gokcen Sahin * [Canvas](https://docs.google.com/presentation/d/1OcXei4-CsBxBiJjmbAqdATPJQGsJLLmFS_B2YgbUes0/edit?usp=sharing) * [GitHub(not completed yet)](https://github.com/macelik/Meta-Pipeline) * [Galaxy Workflow](https://usegalaxy.eu/u/muhammet.celik/w/copy-of-ols-2-project) * Where can others help? * Questions / Comments from the audience? * Is anyone else in the Telegram group interested in applying? 1. It’s a data science interest group with around 300 people! So hopefully more applicants fro OLS-3 * Love the before and after slide! Especially how you state that you must take a first step. * Questions / Comment 2. Bailey Harrington / Chronic Learning / gh: @baileythegreen, \ t: @ChronicLearning, @baileythegreen * Links * [https://chroniclearning.org/](https://chroniclearning.org/) * [https://github.com/baileythegreen/Chronic-Learning](https://github.com/baileythegreen/Chronic-Learning) * [https://github.com/baileythegreen/programming-diagrams](https://github.com/baileythegreen/programming-diagrams) * Where can others help? * If you want to get involved, please contact me: baileythestudent@gmail.com * Questions / Comments from the audience? * +1 to Yo’s congrats on making the website, go you! * Just a thought - I’d love to see this scale (: the power of it being an open project means that folks can take it and establish like little open educational resource hubs in their own department/faculty… i’d particularly love to see that because your careful thoughts and ideas around community engagement are very valuable to copy and adapt 3. Turing Data Stories // Camila, David, Kevin, Sam * People * David Beavan Twitter:[ @DavidBeavan](https://twitter.com/DavidBeavan) GitHub:[ @DavidBeavan](https://github.com/DavidBeavan) * Camila Rangel Smith: Twitter: @[@camilarangels](https://twitter.com/camilarangels) GitHub: [@crangelsmith](https://github.com/crangelsmith) * Sam Van Stroud @samvanstroud * Kevin Xu Github: @kevinxufs * Links * [Our first story: Who was protected by the first COVID-19 lockdown in England?](https://alan-turing-institute.github.io/TuringDataStories-fastpages/covid-19/data%20wrangling/data%20exploration/2020/11/20/Who_was_protected_by_the_first_COVID-19_lockdown.html) * [Our vision](https://github.com/alan-turing-institute/TuringDataStories/blob/master/README.md) * Where can others help? * [Contributing to Turing Data Stories project](https://github.com/alan-turing-institute/TuringDataStories/blob/master/CONTRIBUTING.md) * [GitHub](https://github.com/alan-turing-institute/TuringDataStories) * [Twitter @TuringDStories](https://twitter.com/TuringDStories) * Questions / Comments from the audience? * Any plans to implement comments/other ways for folks to contribute through not necessarily writing an entire story? 2. E.g. highlight datasets and pointers for other folks to continue with analysis and storytelling - “no contribution is too small”! * Questions / Comment * Questions / Comment 4. Kate Simpson / Retrofit POE/ t: @Dr_KateSimpson, g: Kate_Simpson * Open Data index: [https://katesimpson.github.io/Open-access-data-driven-retrofit-evaluation/](https://katesimpson.github.io/Open-access-data-driven-retrofit-evaluation/) * Where can others help? * Suggestions welcome via the issue link: [https://github.com/open-life-science/ols-2/issues/20](https://github.com/open-life-science/ols-2/issues/20) * Twitter: @Dr_KateSimpson * Github: @Kate_Simpson * Questions / Comments from the audience? * How has your work been received in your field? 3. Have been approached more about her work in the community, and also helped co-created another initiative; waiting for the right moment to engage with the academic community, but overall it’s been very rewarding and * * Questions / Comment * Questions / Comment 6. Hilyatuz Zahroh / APBioNetTalks / t: [hilyatuz_zahroh](https://twitter.com/hilyatuz_zahroh), gh:[@hzahroh](https://github.com/hzahroh), gh:@APBioNet \ ## **🗣️ Closing** [Yo] (⏰ 2 minutes) 60 GROUP PHOTO!!!!! _Reference_: Open leadership Framework, Mozilla Open Leaders 6 & 7, Open Life Science 1 _License_: CC BY 4.0, Open Life Science (OLS-2), 2020
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Lens Protocol Subgraph - Manual Testing (SG HACKATHON)

Resources: Hosted Service: https://thegraph.com/hosted-service/subgraph/mike-data-nexus/lens-sg-hack This covers contract that emit events for the Lens Protocol Tests Test 1 ✅ User Account

4/28/2023
TU-Delft celebrates a year of Open Science Course: Share your research with the world

Project background The Delft University of Technology (TU Delft) in the Netherlands runs once a year a Massive Online Open Course (MOOC) on Open Science on the edX platform => Open Science: Share your research with the world. Our primary target is PhD candidates but the MOOC is meant also for MSc students, researchers, support staff, policy makers that want to learn the basic principles of and motivations behind Open Science. The OSMOOC has been running for multiple years with a decreasing number of enrollments and varying levels of engagement. We have high dropout rates and we do not know if the participants practice Open Science later on. Our project goal was to improve the engagement by creating a community around the MOOC participants. _Figure1: _Logo of the Open Science MOOC and titles of the six modules contained in the course. Image by TU Delft and licensed under CC-BY-NC-SA 4.0 International License. Expectations from this program Since we had both just started in our jobs as open science teachers, the first thing we hoped to learn was more about the different themes within Open Science. We also hoped that through our participation in the OLS program, we would learn more ways to engage our MOOC’s participants and build a solid community, as well as workflows and processes to make our own work more open.

7/18/2022
Speed Blog: Project name, team members

THIS PAGE IS OBSOLETE. NOTES MOVED TO: https://github.com/open-life-science/policies-procedures-and-docs/blob/main/cohort-procedures-and-templates/speedblog.md ==This document provides guidance for you to summarize your OLS journey so far and the project you worked on during the entire period of OLS-2 in a speedblog. Please draft your speedblog in your 'mentor-mentee hackMD notes' and share with the OLS team.== Ideally your speed blog will be a written piece with a picture (max 2) and contain some links and references. In terms of word count you are aiming for between 500 and 1200 words. We will post your speedblog on OLS website: openlifesci.org/posts See this post for guidance on speed blogging: https://software.ac.uk/speed-blogging-and-tips-writing-speed-blog-post Example you can draw from: https://openlifesci.org/posts/2019/10/21/culture-track Here are a few questions to help you generate ideas and content for your speedblog:

6/1/2022
Week 10

:earth_asia: Cohort call Schedule: Open Science III: Next steps - applying FAIR research principles Date and time: 05 November 2020, 09:00 - 10:30 LONDON, Duration: 90 minutes Video on YouTube :house: Before this meeting After this meeting: Think about and plan to apply FAIR principles to your project in your own time. Resources for more information have been linked in the notes.

3/9/2021
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