---
# System prepended metadata

title: Meeting Note 11/20
tags: [meeting note]

---

# Meeting Note 11/20
###### tags: `meeting note`

[TOC]

## graph.txt

```
N_nd N_pr N_gp N_ag N_cm N_lc
cg[0] cg[1] ... cg[N_gp-1]
cm[0, 0, 0] ...
ag[0] lc[0] 
n_gp[0, 0] gp[0, 0] ... gp[0, n_gp[0]-1]
n_gp[1, 0] gp[0, ]
.
.
.
```

- first line
    - `N_nd`: # of nodes
    - `N_pr`: # of periods per day
    - `N_gp`: # of contact groups
    - `N_ag`: # of age groups
    - `N_cm`: # of contact matrix
    - `N_lc`: # of 鄉鎮市區
- second line
    - `cg[i]` contact matrix to use for group `i`
- following `N_cm` blocks, each `N_ag^2` floating point numbers
- following `N_nd` blocks, each block denotes a node `i`
    - first line
        - age group and location group of node `i`
    - following `N_period` lines
        - first is the # of groups in period `j`
        - then the contact groups


## COVID_19.conf

```
prob_transmission 0.2
latent_period 5.5
infectious_period 3.7
prob_death 0.24
prob_immune 0.5
```

Line
1. $P_\text{trans}$
    * Transmission probability, where $0 \le P_\text{trans} \le 1$
2. $T_\text{latent}$
    * Mean duration of latent period, where $T_\text{latent} \in \mathbb{R}$
3.  $T_\text{infect}$
    * Mean duration of infectious period, where $T_\text{infect} \in \mathbb{R}$
3. $P_\text{death}$ 
    * Probability of dying, where $0 \le P_\text{death} \le 1$
4. $P_\text{immune}$
    * Probability of immunity, where $0 \le P_\text{immune} \le 1$ 
5. $\{I_\text{place}, N_\text{infector}\}[\{I_\text{place}, N_\text{infector}\}...]$
    * A list of pair of integer, representing initial infectors that in which place and at what number. where $0 \le I_\text{place} \lt 368$ and $N_\text{infector} \in \mathbb{N}\cup\{0\}$


##  vaccine.conf

```
// vaccine_efficacy_waning -5.5 47.9 81.5 72.5 70.6 57.0 12.0 12.8 27.8
// vaccine_death_waning ...
vaccine_efficacy 95.87
rollout 123456
strategy age 60
```

Line
1. $E_\text{vaccine}$
    * Efficiency of vaccine, where $E_\text{vaccine} \in \mathbb{R}$
<!--1. $E_{0-13d}$ $E_{14-30d}$ $E_{1-2m}$ $E_{2-3m}$ $E_{3-4m}$ $E_{4-5m}$ $E_{5-6m}$ $E_{6-7m}$ $E_{\ge7m}$
    * vaccine effectiveness after
        * 0-13 days
        * 13-30 days
        * 1 month
        * 2 month
        * ...
        * 7 month
    * where $E \in \mathbb{R}$
    * [ref.](https://www.nejm.org/doi/full/10.1056/NEJMoa2114114?query=featured_home)-->
2. $N_\text{rollout}$
    * Number of vaccine rollout per **day**, where $N_\text{rollout} \in \mathbb{N}$
3. $\text{strategy [args ...]}$
    * A string represent the strategy, and required arguments for that strategy


## TODO

* 廖廷恩: 
    * format of **COVID_19.conf, vaccine_strategy.conf**
    * Deep into Visualization Module
    * check Model Intro.

* 郭庭佑:
    * SIR model with complete OOP
* 沈家駿:
    * Deep into Visualization Module
    * 


* 廖晊程:
    * modify initialization module to output new format of graph.txt