# Meeting Note 11/20
###### tags: `meeting note`

[TOC]

## graph.txt

N_nd N_pr N_gp N_ag N_cm N_lc
cg[0] cg[1] ... cg[N_gp-1]
cm[0, 0, 0] ...
ag[0] lc[0] 
n_gp[0, 0] gp[0, 0] ... gp[0, n_gp[0]-1]
n_gp[1, 0] gp[0, ]
.
.
.

- first line
- `N_nd`: # of nodes
- `N_pr`: # of periods per day
- `N_gp`: # of contact groups
- `N_ag`: # of age groups
- `N_cm`: # of contact matrix
- `N_lc`: # of 鄉鎮市區
- second line
- `cg[i]` contact matrix to use for group `i`
- following `N_cm` blocks, each `N_ag^2` floating point numbers
- following `N_nd` blocks, each block denotes a node `i`
- first line
- age group and location group of node `i`
- following `N_period` lines
- first is the # of groups in period `j`
- then the contact groups

## COVID_19.conf

prob_transmission 0.2
latent_period 5.5
infectious_period 3.7
prob_death 0.24
prob_immune 0.5

Line
1. $P_\text{trans}$
* Transmission probability, where $0 \le P_\text{trans} \le 1$
2. $T_\text{latent}$
* Mean duration of latent period, where $T_\text{latent} \in \mathbb{R}$
3. $T_\text{infect}$
* Mean duration of infectious period, where $T_\text{infect} \in \mathbb{R}$
3. $P_\text{death}$
* Probability of dying, where $0 \le P_\text{death} \le 1$
4. $P_\text{immune}$
* Probability of immunity, where $0 \le P_\text{immune} \le 1$
5. $\{I_\text{place}, N_\text{infector}\}[\{I_\text{place}, N_\text{infector}\}...]$
* A list of pair of integer, representing initial infectors that in which place and at what number. where $0 \le I_\text{place} \lt 368$ and $N_\text{infector} \in \mathbb{N}\cup\{0\}$

## vaccine.conf

// vaccine_efficacy_waning -5.5 47.9 81.5 72.5 70.6 57.0 12.0 12.8 27.8
// vaccine_death_waning ...
vaccine_efficacy 95.87
rollout 123456
strategy age 60

Line
1. $E_\text{vaccine}$
* Efficiency of vaccine, where $E_\text{vaccine} \in \mathbb{R}$
<!--1. $E_{0-13d}$ $E_{14-30d}$ $E_{1-2m}$ $E_{2-3m}$ $E_{3-4m}$ $E_{4-5m}$ $E_{5-6m}$ $E_{6-7m}$ $E_{\ge7m}$
* vaccine effectiveness after
* 0-13 days
* 13-30 days
* 1 month
* 2 month
* ...
* 7 month
* where $E \in \mathbb{R}$
* [ref.](https://www.nejm.org/doi/full/10.1056/NEJMoa2114114?query=featured_home)-->
2. $N_\text{rollout}$
* Number of vaccine rollout per **day**, where $N_\text{rollout} \in \mathbb{N}$
3. $\text{strategy [args ...]}$
* A string represent the strategy, and required arguments for that strategy

## TODO

* 廖廷恩:
* format of **COVID_19.conf, vaccine_strategy.conf**
* Deep into Visualization Module
* check Model Intro.

* 郭庭佑:
* SIR model with complete OOP
* 沈家駿:
* Deep into Visualization Module
*

* 廖晊程:
* modify initialization module to output new format of graph.txt