git clone git@github.com:username/repo.git
cd repo
git remote add upstream git@github.com:nf-core/repo.git
Git + GitHub configuration
Pull updates
git status # check if we have any uncommitted changes
git pull # implicitly pulls default remote - origin
git pull upstream dev
git push # implicity pushes to default remote - origin
Git + GitHub configuration
Do work
git checkout -b my_feature
git commit -am "I did a thing"
git push -u origin my_feature
remote:remote: Create a pull request for 'my_feature' on GitHub by visiting:remote: https://github.com/user/repo/pull/new/my_featureremote:
