# nf-core/hackathon ## Welcome to the nf-test subgroup :rocket: --- ## We will be working on adding ## nf-test to modules and pipelines --- ## nf-test * A simple testing framework for Nextflow pipelines * Website: https://code.askimed.com/nf-test/ --- ## Have a look at our project board: https://github.com/orgs/nf-core/projects/65/views/9 ## Join our Slack channel: https://nfcore.slack.com/channels/hackathon-mar-2024-nftest --- * Claim a card on the project board to work on. If there is no card for you, create one. * Don't hesitate to ask us if you have any questions --- ## Getting started with nf-test in nf-core * We recommend starting with generating `process` tests for nf-core/modules (especially the ones used in rnaseq/fetchngs) Examples: * [nf-core/fastqc](https://github.com/nf-core/modules/tree/master/modules/nf-core/fastqc/tests) * [nf-core/bwa](https://github.com/nf-core/modules/blob/master/modules/nf-core/bwa/aln/tests) --- * :point_right: We recommend reviewing [fetchngs](https://github.com/nf-core/fetchngs) which is currently the best-practice implementation for nf-test usage in nf-core * :point_right: Consider generating `process`/`sub-workflow`/`workflow`/`pipeline` tests for [nf-core/rnaseq](https://github.com/nf-core/rnaseq) or pipeline of your choice --- ## Some useful links for beginners * Migrate pytest to nf-test: https://nf-co.re/docs/contributing/modules#migrating-from-pytest-to-nf-test * General nf-test docs in nf-core: https://nf-co.re/docs/contributing/modules#writing-nf-test-tests * nf-test official docs: https://www.nf-test.com/docs/getting-started/ --- ## Review buddies Let's pair up and review each others PRs :eyes: --- ## Thank you for your participation & happy hacking :computer: