---
# System prepended metadata

title: Sloth annotation
tags: [sloth]

---

# Sloth annotation

###### tags: `sloth`

# 1. Toga

Diego de Panis has ran TOGA for Tamandua tetradactyla and C. hoffmanni (DNA zoo, only scaffolds equal or larger than 18Kb) using C. didactylus as a reference. Bellow we  see the busco runs for the predictions:


| Column 1 | toga-didactylus_tamandua | toga-didactylus_hoffmanni |
| -------- | -------- | -------- |
| Busco protein    | C:95.9%[S:44.8%,D:51.1%],F:0.6%,M:3.5%,n:9226     | C:93.9%[S:43.4%,D:50.5%],F:1.7%,M:4.4%,n:9226    |
| Busco transcriptome | C:96.3%[S:1.0%,D:95.3%],F:0.4%,M:3.3%,n:9226 | C:96.2%[S:2.3%,D:93.9%],F:0.4%,M:3.4%,n:9226  |


## 1.1. Busco for ensemnl old prediction of C. hoffmanni

Ensembl old prediction is https://www.ensembl.org/Choloepus_hoffmanni/Info/Index


| Column 1 | Column 2 | 
| -------- | -------- | 
| ensembl protein    | C:38.2%[S:37.6%,D:0.6%],F:13.0%,M:48.8%,n:9226     |
| ensembl transcripts | C:38.0%[S:37.4%,D:0.6%],F:13.0%,M:49.0%,n:9226 |



- [ ] Put here also busco results for those in genome mode

