# Camilla - Auto-generated Table of Content [ToC] ## 1 pti_organel ### 1.1 pti_organel MBG= 6001K ```/software/team311/mu2/mbg-noKbug/MBG/bin/MBG -k 6001 -w 250 -a 5 -u 150 -i pti_organel_genomes.HiFiMapped.fa.gz -o pti_organel_genomes.HiFiMapped.6k.gfa -t 18 ``` ![](https://i.imgur.com/vbpiMFH.png) ## 2 strob_organel ### 2.1 strob_organel MBG= 1001K ``` /software/team311/mu2/mbg-noKbug/MBG/bin/MBG -k 1001 -w 250 -a 5 -u 150 -i strob_organel_genomes.HiFiMapped.fa.gz -o strob_organel_genomes.HiFiMapped.1k.gfa -t 18 ``` ### 2.2 strob_organel MBG= 6001K ```echo '/software/team311/mu2/mbg-noKbug/MBG/bin/MBG -k 6001 -w 250 -a 5 -u 150 -i strob_organel_genomes.HiFiMapped.fa.gz -o strob_organel_genomes.HiFiMapped.6k.gfa -t 18 ``` ![](https://i.imgur.com/79UQgjU.png) ### 2.2.1 strob_organel MBG= 6001K chloroplast 1 ![](https://i.imgur.com/uuL2E5L.png) ``` # Related mitogenome is 159983 bp long and has 135 genes contig_id frameshifts_found genbank_file length(bp) number_of_genes final_mitogenome rps16 final_mitogenome.gb 159207 110 ```