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# System prepended metadata

title: nf-core Mentorship Round 2

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# nf-core Mentorship Round 2
[@atrigila](github.com/atrigila) & [@matthdsm](github.com/matthdsm)


## Learned so far
- Nuances of nf-core pipeline development versus vanilla Nextflow DSL-2
- Building a pipeline using nf-core modules and customizing modules.
- Contributing a nf-core module (building the module, PR, reviews) 
- Modifying samplesheet requirements to match my inputs 
- Building adequate sample tests, both for modules and pipelines

## Small Targets

- Building (and ideally contributing!) a subworkflow 
- Starting a pipeline from different entry points (similar to sarek) 
- Build my own docker containers / submit bioconda recipes and then make them work as nf-core modules

## Big Picture

- Contribute with a modules and subworkflows (e.g. ancestry estimation) to a bigger pipeline such as GWAS

## References
- Prototype workflow
https://github.com/atrigila/nf-core-saliva
- New nf-core module
https://github.com/nf-core/modules/pull/2683