# Gut Microbiome Data Analysis: from 16S Gene Sequencing to Complete Metagenomes Here is information about metagenomics class in the **[Summer School: AI for Bio-Medicine](https://leibniz-ai-lab.de/?etn=summer-school-ai-for-bio-medicine)** (June 29th 2022). ## Schedule ![](https://i.imgur.com/FY5eCt1.jpg) ### Lecture: Gut Microbiome Data Analysis: from 16S Gene Sequencing to Complete Metagenomes * Download slides :arrow_right: [here](https://drive.google.com/file/d/1W9dvIgeTFo8JVGlsjT1fcTGwa92ewM06/view?usp=sharing). ### Hands-on Visualizing microbiome data with [MicrobiomeAnalyst](https://www.microbiomeanalyst.ca/): We are going to use an example dataset from MicrobiomeAnalyst, please download it before class :wink: * Download data :arrow_right: [here](https://www.microbiomeanalyst.ca/MicrobiomeAnalyst/resources/data/ibd_data.zip). * Download slides :arrow_right: [here](https://drive.google.com/file/d/1NY_Zj0oHHUYJuLsYS-A7krVcUzJYxH-N/view?usp=sharing). :::info :female-construction-worker: **Dataset info:** Stool samples from Inflammatory bowel disease patients (n=43) ASV table: *ibd_asv_table.txt* Metadata: *ibd_meta.csv* (Control; CD:Crohn's disease) Taxonomy table: *ibd_taxa.txt* Phylogenetic tree: *ibd_tree.tre* List of taxa: *ibd_tsea_list.txt* :::