Ubuntu 上面安裝 r 套件的方式

sudo apt install --no-install-recommends r-cran-[xxxxxxxxx]

例如：

• sudo apt install --no-install-recommends r-cran-tidyverse
• sudo apt install --no-install-recommends r-cran-brms

Basic

• tidyverse
• psych

Statistical modeling

• rstan
• cmdstanr
• brms
• lme4
• lavaan

cmdstanr

1. 按照官網說明，缺套件就補安裝。
2. 缺make 請參見 https://mc-stan.org/docs/cmdstan-guide/cmdstan-installation.html#cpp-toolchain

sudo apt install g++
sudo apt install make

Scientific writing

• quarto
• rticles

Book related

• rethinking
• resampledata3
  and this github lchihara/MathStatsResamplingR.

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BTW, 在ubuntu上跑同一段 brms，

• Win11, 6.2 (s)
• Mac, 10.x (s)
• Ubuntu, 2.0 (s) !!!

fit <- brm(count ~ zAge + zBase * Trt + (1|patient),
           data = epilepsy, family = poisson(),
           chains = 4, cores = 4, #threads = threading(3),# opencl = opencl(c(0,0)),
           backend = "cmdstanr")