--- tags: meeting, spatial, scverse, cellxgene, SOMA --- # 2022-08-24: OME-NGFF + SOMA meeting *Attendees:* Ambrose Carr, Luca Marconato, Kevin Yamauchi, Isaac Virshup, Giovanni Palla ## Agenda * Present projects * OME-NGFF/ SpatialData * SOMA * Questions - where in the data stack does SOMA live? Will CZI be storing all data? - Generation of raw data - - Is it possible to point the SOMA query engine to outside data sources? - Yes, but they will have a host copy - Their hosted – for holding standardized schemas - does SOMA have a plan for image data, polygons, points, etc.? - Is there is a pathway for interoperatiblity (what "interoperability" means depends on the answer to the previous questions)? - [ac] What's the point of intersection between OME-NGFF and SOMA? `accumulate`? * Problems/ overlaps ## Notes * Luca presents OME-NGFF * Qs: * Mask first, then polygons? (yes) * Operations * Queries on this data * does it need to live on czi cloud * sets of variables need merging * Controlled set of variable on CZI cloud makes this easier * tile shapes * Performance work * SOMA model * There is an composition of arrow buffers which maps to a tiledb object * So other sources could be supported