---
# System prepended metadata

title: Bioinformatics Recordings

---

# Bioinformatics Recordings

- [Command Line 1](https://youtu.be/zl-bJqTtZMw)
- [RC Python assignment](https://youtu.be/uoKwZTastuQ)
- [Geneious crash course](https://www.youtube.com/watch?v=DzEfq7459TM&feature=youtu.be)
- [Command line and stats: Part 2](https://www.youtube.com/watch?v=5Xa30o3NNuQ)
- [Using NCBI's databases; Geneious; Alignments](https://youtu.be/bLjJLuiSGls)
- [Trimmomatic, PEAR, Filezilla](https://youtu.be/xRAfz8I8grk)
- [K-mer lecture screen record, unix resources](https://youtu.be/CZr34Yu5ThE)
- [KAT example](https://youtu.be/xFpHbO-CZIw)
- [Trinity](https://youtu.be/miBcIHybX2U)
- [SR Visualizing alignments](https://youtu.be/vNFLf-ILtto)
- [Rad seq example](https://youtu.be/E7qnORYTOCY)
- [Hisat2](https://youtu.be/km2ea4Mpd-A)
- [Metagenomics & Microbiome analyses via "Mothur" (Colston 2019)](https://youtu.be/XK_GaRS7Q-k)
- [Scorpion Venom Extraction](https://www.youtube.com/watch?v=v8AzlLWVi3w)
- [Splice aware aligners (2)](https://youtu.be/22mDg6an0FI)
- [DEseq via "R" & Assembly quality control pt1](https://youtu.be/lSbFmtEPi1E)
- [Interpreting qMS results with Scaffold and BLASTP](https://youtu.be/aevv_FbA0vA)
## All links
[All the links Bioinformatics](https://sites.google.com/view/rokyta-bioinformatic-vids/home)
