---
# System prepended metadata

title: pyMol

---

# Question_2

#retrive protien
fetch 1a30

#to hide all visuals 
cmd.hide("everything","all")
	
#show cartoon figure of 1a30
cmd.show("cartoon"   ,"1a30")
	
#select cpk ligand found on PBD molecule information.
select ligand, chain C and resn GLU+ASP+LEU 
	
#cpk ligand shown in spheres
cmd.show("spheres"   ,"ligand")
	
#cpk ligand color change
cmd.color_deep("cyan", 'ligand', 0)
	
get_view



# Question_3

#load 1CWA protien structure onto pyMOL
fetch 1CWA
	
#hide protien struture to better see selected items
cmd.hide("everything","all") 
	
#selecting side chain A atoms
select chainA, chain A 
	
#selecting visual of side chain A in cartoon form
cmd.show("cartoon"   ,"chainA")
	
#changeing color of chain A cartoon
cmd.color_deep("wheat", 'chainA', 0) 

#selecting side chain C atoms
select chainC, chain C 

#selecting visual of side chain C in stick form 89 atoms
cmd.show("sticks"    ,"chainC")

#changeing color of chain C stick
cmd.color_deep("blue", 'chainC', 0) 
	

get_view