# 🔧 Debugging Cycle Guide ## 🛠 Step-by-Step ### 1. Run CMake Build ```bash ./00_cmk.sh 2>&1 | tee log.cmake_dschen ``` ### 2. Check & Debug Review the generated `log.cmake_dschen` logfile for errors or issues. ### 3. Modify Source Code Edit the relevant files under the `code/` directory. --- ## 🔁 Debugging Cycle Flowchart ```mermaid graph TD A[Run CMake Build] B[Check and Debug Based on Logfile] C[Modify Source Code] A --> B B --> C C --> A ``` --- # 🧰 Modifications & Fixes ## ❗ OOPS ### 1. Remove Unsupported Intel Flag `-ip` ```bash cd code/ grep -rn --include='*cmake' '\-ip' . find . -name '*.cmake' -exec sed -i 's/ -ip / /g' {} + ``` ### 2. `f_c_string` Conflict in `iso_c_binding` #### Original ```fortran use, intrinsic :: iso_c_binding ``` #### Workaround ```fortran use, intrinsic :: iso_c_binding, only: c_int, c_double, c_bool, c_char, c_ptr, c_double_complex, & c_null_char, c_loc, c_f_pointer, c_associated ``` --- ## 📦 IODA ### 1. `f_c_string` Conflict 📍 Location: `/home/cwa/tingchi/mpas_bundle_v3/code/ioda/src/obsspace_mod.F90` ### 2. Narrowing Conversion Error 📍 Location: `/home/cwa/tingchi/mpas_bundle_v3/code/ufo/src/ufo/filters/ConventionalProfileProcessingParameters.h` #### Original ```cpp oops::Parameter<float> AvgP_GapLogPDiffMin {"AvgP_GapLogPDiffMin", std::log(5.0), this}; ``` #### Workaround ```cpp oops::Parameter<float> AvgP_GapLogPDiffMin {"AvgP_GapLogPDiffMin", std::log(5.0f), this}; ``` --- ## 🌐 MPAS ### 1. Remove Incompatible `icx` Flags `-threads` and `-cxxlib` #### Root Cause: ESMF introduces these flags in `link.txt`. Since ESMF is not needed, comment out its inclusion. #### Diff Patch ```diff diff --git a/CMakeLists.txt b/CMakeLists.txt index 70a99b2..f446985 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -62,7 +62,7 @@ ecbuild_bundle( PROJECT ufo GIT "https://github.com/JCSDA/ufo.git" # Find external ESMF for mpas-model (optional) -find_package(ESMF 8.3.0 MODULE) +#find_package(ESMF 8.3.0 MODULE) set(MPAS_DOUBLE_PRECISION "ON" CACHE STRING "MPAS-Model: Use double precision 64-bit Floating point.") set(MPAS_CORES init_atmosphere atmosphere CACHE STRING "MPAS-Model: cores to build.") ``` --- ## 🧪 mpas-jedi ### 1. Remove Incompatible `icx` Flags Same root cause as MPAS: ESMF brings `-threads` and `-cxxlib`. --- # ✅ Run CTest ### 1. How to Run? ```bash nohup ./run_ctest.sh & ``` ### 2. Check Results Review logs under: ``` log/log.ctest.<PKG> ```