dondraper

@dondraper

Joined on Apr 28, 2020

  • About me Carlos Gonzalez Oliver Emai: carlos@ozeki.io Homepage: carlosoliver.co My interests: Structural Bioinformatics Graph algorithms Representation learning
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  • repo link Overview 0. Data Collection / Annotation (RNAGLib) Retrieve set of RNAs from PDB Find RNA-(protein/rna/ligand/ion) interface positions Slice graphs into interfaces and non-interface Find labels for binding partners (later after we try binary prediction) This part of the project is now moved to another document. See RNAGLib
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  • Data in Python: Intro to Pandas & a bit of Seaborn :panda_face: :ocean: By: Carlos Oliver (aka. @dondraper :man_in_business_suit_levitating:) Video Walkthrough {%youtube 5iu6HRuvZ4M %} Motivation :zap: Tabular/matrix data (i.e. data entered in rows and columns of a table) is pervasive in many fields, including the life sciences :microscope: The most widely used software for dealing with this kind of data is Microsoft Excel.
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