# Cluster ToDo

## General
- [x] Upgrade ubuntu 2022
- [x] Generar cluster
- [x] SGE
- [x] NIS
- [x] NFS
- [ ] ssh con doble autentifacion
- [ ] Implementar modulos con Lmod
- [x] Cosas nvidia para las que tienen tarjeta. (drivers, nvtop)
- [ ] Timeshift (lo de los respaldos)

## Software
- [ ] Software general (apt-get, apt)
- [x] ssh
- [x] sshfs
- [x] htop
- [x] Byobu
- [x] x2go (x2goclient x2goserver)
- [x] terminator, tillix
- [x] parallel
- [x] gnome-tweaks gnome-shell-extensions
- [x] tree
- [x] build-essential (gcc,g++,make)
- [x] curl
- [x] wget
- [x] gdebi-core (instalar debs)
- [x] (run autoremove)
- [ ] flatpack?
- [x] shutter
- [x] xvfb (algo para el x-server)
- [x] apcupsd (para los que tienen ups)

- [x] ubuntu-drivers
- [ ] Software general (deb-get)
- [x] R-studio (probablemente falta R base)
- [x] VScode
- [x] Git-kraken
- [x] Rclone
- [x] zotero
- [x] pandoc
- [x] Zoom
- [x] Chrome
- [ ] Chromium? (en todo caso brave)
- [x] brave
- [x] bitwarden o keepassx ?
- [x] sejda ?
- [x] rocketchat desktop?
- [x] bat, lsd, duf, fd
- [ ] Software general (con Flatpacks, para software grande)
- [ ] Inskape (aunque el repositorio de 22.04 está actualizado)
- [ ] Software neurostuff
- [x] mrtrix
- [x] fsl
- [x] fsleyes
- [x] freesurfer
- [ ] DSI studio
- [ ] ants
- [x] afni
- [ ] microGL?
- [ ] slicer ?
- [ ] itk-SNAP ?
- [ ] dsistudio?
- [ ] fiji?
- [ ] EEGLAB?
- [x] Matlab 2022 original
- [x] Brainstorm
- [x] Limpiar el caos de librerias inaccesibles en el path de matlab
- [ ] Habilitar containers: Docker y singularity
- [ ] Centralizar repositorio de containers?
- [ ] fmriprep
- [ ] qsiprep
- [ ] neurodesk
- [ ] ~~Conda centalizado compatible con conda local (RIP)~~
- [ ] Brkraw
- [ ] Dipy
- [ ] Nilearn
- [ ] Idear una forma para usar software de conda mediante bashes y scripts

- [ ] Script para actualizar software en server. Debs y flatpacks

## Otras cosas
- [ ] Ganglia
- [ ] Clean homes!
- [ ] HAcer una entrada en la wiki con todo el software disponible
- [ ] Actualizar la wiki con todo esto jeje
- [ ] Rhesus con vmWAre para maquina virtual de paravision
- [ ] Buscar mas neuro software de neurodesktop
- [ ] cinnamon-desktop-environment plasma-desktop budgie-desktop lxde gnome-session
- [x] exa (o lsd), bat, fd
- [ ] Julia, rust (?)
- [ ] latex?
- [ ] pdflatex

## Sueño guajiro
- [ ] Separar repositorios del doc: uno para sysadmin y otro para procesamiento, abrir repo para procesamiento y documentarla
- [ ] La comunidad lanirem acutaliza la wiki y el repo abierto jeje
- [ ] Espejear la visualizacion del ganglia de cimat
- [ ] Hackaton Don Clusterio

## Legacy debs
### Packs
libeigen3-dev zlib1g-dev libqt4-opengl-dev libgl1-mesa-dev \
libfftw3-dev libtiff5-dev \
libqt5opengl5 libqt5opengl5-dev \
libcanberra-gtk3-module libcanberra-gtk-module
libmng-dev \
libgtkglext1 \
libssl-dev libcurl4-openssl-dev \

### Apps

### Themes
numix-blue-gtk-theme numix-gtk-theme numix-icon-theme \
papirus-icon-theme \
moka-icon-theme \ arc-theme

### don clusterio pendientes

Cosas que quedaorn pendientes en la wiki del software don clusterio
| [`app_name`](link) | <i>App description</i> |
---CLI apps
tmux\
tcsh \
build-essential \
cmake

modulos (http://modules.sourceforge.net/)
latex