--- type: slide --- #### Towards Segment Anything Model (SAM) for Medical Image Segmentation: A Survey --- #### Problems: - exisiting model are often tailored for specific modalities and targets - limits their capacity for further generalization to tasks --- #### Introduction: - evaluate the performancee of SAM with different modes in different task - investigate methods to better adapt SAM to medical image segementation task --- #### Background: SAM architecture ![](https://i.imgur.com/1GxsLWc.png) --- #### Performance of SAM in Medical Image Segmentation - **Pathology image segmentation** - **Liver tumor segementation from CECT** - **Polyps segemntation from colonoscopy images** - **Brain MRI segmentation** - SAM can obtain comparable or even better performance compared with BET - **Abdominal CT organ segmentation** - **Endoscopic Surgical instrument segmentation** - **Other multi-dataset evaluations** --- #### evaluate SAM on 12 datasets ![](https://i.imgur.com/jNQd6Zd.png) --- #### summary of SAM dirctly used in medical image - SAM requires substantial human information to obtain overall moderate performance using only few point or bounding box prompts - SAM even totally fails in situations when the segmentation targets have weak boundaries with low-contrast and smaller and irregular shape --- #### Adapting SAM to Medical Image Segmentation - fine-tuning SAM on medical datasets (small fraction/ parameter-efficient fine-tuning) - CNN as complementary encoder - extending the usability of SAM to medical images - enhancing the robustness against different prompts - result is highly dependent on the prompt, and the model tends to be more sensitive to wrong prompts - Input augmentation with SAM --- #### fine-tuning ![](https://i.imgur.com/E3lop8w.png) --- #### fine-tuning ![](https://i.imgur.com/N2mTgMk.png) --- #### enhancing the robustness against different prompts ![](https://i.imgur.com/C9kZy4Y.png) --- #### enhancing the robustness against different prompts ![](https://i.imgur.com/NwjVfMS.png) --- #### Conclusion - segmentation performance varies significantly across different datasets and tasks --- #### Future Directions - buliding large datasets - integrating clinical domain knowledge - adapt SAM 2D to 3D - Reduce the annotation cost - beyond points and box prompts - integration into clinical workflow --- - wilson experiment ![](https://i.imgur.com/xSN6TsC.png) ---