# xml
## config_machines

<?xml version="1.0"?>
<config_machines version="2.0">
  <machine MACH="centos7-linux">
    <DESC>
      Example port to centos7 linux system with gcc, netcdf, pnetcdf and mpich
      using modules from http://www.admin-magazine.com/HPC/Articles/Environment-Modules
    </DESC>
    <NODENAME_REGEX>n11</NODENAME_REGEX>
    <OS>LINUX</OS>
    <COMPILERS>intel</COMPILERS>
    <MPILIBS>impi</MPILIBS>
    <PROJECT>cent</PROJECT>
    <SAVE_TIMING_DIR> </SAVE_TIMING_DIR>
    <CIME_OUTPUT_ROOT>$ENV{HOME}/cent/scratch</CIME_OUTPUT_ROOT>
    <DIN_LOC_ROOT>$ENV{HOME}/cent/inputdata</DIN_LOC_ROOT>
    <DIN_LOC_ROOT_CLMFORC>$ENV{HOME}/cent/inputdata/lmwg</DIN_LOC_ROOT_CLMFORC>
    <DOUT_S_ROOT>$ENV{HOME}/cent/archive/$CASE</DOUT_S_ROOT>
    <BASELINE_ROOT>$ENV{HOME}/cent/cesm_baselines</BASELINE_ROOT>
    <CCSM_CPRNC>$ENV{HOME}/cent/tools/cime/tools/cprnc</CCSM_CPRNC>
    <GMAKE>make</GMAKE>
    <GMAKE_J>8</GMAKE_J>
    <BATCH_SYSTEM>none</BATCH_SYSTEM>
    <SUPPORTED_BY>[e-mail]</SUPPORTED_BY>
    <MAX_TASKS_PER_NODE>4</MAX_TASKS_PER_NODE>
    <MAX_MPITASKS_PER_NODE>4</MAX_MPITASKS_PER_NODE>
    <PROJECT_REQUIRED>FALSE</PROJECT_REQUIRED>
    <mpirun mpilib="default">
      <executable>mpirun</executable>
      <arguments>
        <arg name="ntasks">-np 4</arg>
      </arguments>
    </mpirun>
    <module_system type="module" allow_error="true">
      <init_path lang="perl">/usr/share/Modules/init/perl.pm</init_path>
      <init_path lang="python">/usr/share/Modules/init/python.py</init_path>
      <init_path lang="csh">/usr/share/Modules/init/csh</init_path>
      <init_path lang="sh">/usr/share/Modules/init/sh</init_path>
      <cmd_path lang="perl">/usr/bin/modulecmd perl</cmd_path>
      <cmd_path lang="python">/usr/bin/modulecmd python</cmd_path>
      <cmd_path lang="sh">module</cmd_path>
      <cmd_path lang="csh">module</cmd_path>
      <modules>
        <command name="purge"/>
      </modules>
      <modules compiler="intel">
       <command name="load">intel</command>
       <command name="load">mpi</command>
       <command name="load">cdf</command>
      </modules>
    </module_system>
    <environment_variables>
      <env name="OMP_STACKSIZE">256M</env>
    </environment_variables>
    <resource_limits>
      <resource name="RLIMIT_STACK">-1</resource>
    </resource_limits>
  </machine>

  <default_run_suffix>
    <default_run_exe>${EXEROOT}/cesm.exe </default_run_exe>
    <default_run_misc_suffix> >> cesm.log.$LID 2>&amp;1 </default_run_misc_suffix>
  </default_run_suffix>

</config_machines>

## config_compilers

<?xml version="1.0" encoding="UTF-8"?>
<config_compilers version="2.0">

<compiler COMPILER="intel" MACH="centos7-linux">
  <CFLAGS>
    <base> -qno-opt-dynamic-align -fp-model precise -std=gnu99 </base>
    <append DEBUG="FALSE"> -O2 -debug minimal </append>
    <append DEBUG="TRUE"> -O0 -g </append>
  </CFLAGS>
  <CPPDEFS>
    <!-- http://software.intel.com/en-us/articles/intel-composer-xe/ -->
    <append> -DFORTRANUNDERSCORE -DCPRINTEL</append>
  </CPPDEFS>
  <CXX_LDFLAGS>
    <base> -cxxlib </base>
  </CXX_LDFLAGS>
  <CXX_LINKER>FORTRAN</CXX_LINKER>
  <FC_AUTO_R8>
    <base> -r8 </base>
  </FC_AUTO_R8>
  <FFLAGS>
    <base> -L/usr/local/netcdf-fortran/lib -lnetcdff -L/usr/local/netcdf-c/lib -lnetcdf -lnetcdf -lm -qno-opt-dynamic-align  -convert big_endian -assume byterecl -ftz -traceback -assume realloc_lhs -fp-model source  </base>
    <append DEBUG="TRUE"> -O0 -g -check uninit -check bounds -check pointers -fpe0 -check noarg_temp_created </append>
    <append DEBUG="FALSE"> -O2 -debug minimal </append>
  </FFLAGS>
  <FFLAGS_NOOPT>
    <base> -O0 </base>
  </FFLAGS_NOOPT>
  <FIXEDFLAGS>
    <base> -fixed -132 </base>
  </FIXEDFLAGS>
  <FREEFLAGS>
    <base> -free </base>
  </FREEFLAGS>
  <MPICC> mpiicc  </MPICC>
  <MPICXX> mpiicpc </MPICXX>
  <MPIFC> mpiifort </MPIFC>
  <NETCDF_C_PATH>/usr/local/netcdf-c</NETCDF_C_PATH>
  <NETCDF_FORTRAN_PATH>/usr/local/netcdf-fortran</NETCDF_FORTRAN_PATH>
  <PNETCDF_PATH>/usr/local/pnetcdf</PNETCDF_PATH>
</compiler>
</config_compilers>