# Hack MD of Hack MDs

[8/18/20-8/20/20 - CRC Scripts for genome assembly, including Fastqc, Trimmomatic, Velvet, and Glimmer](https://hackmd.io/@NFpEogXySTuWExLvDQQHig/H1NojYYMw)

[8/25/20 - Julia Assembly](https://hackmd.io/@NFpEogXySTuWExLvDQQHig/H1AOChfmw)

[String Alignment](https://hackmd.io/@NFpEogXySTuWExLvDQQHig/rkbMol3Xw)

[Review 09-03-20](https://hackmd.io/@NFpEogXySTuWExLvDQQHig/ryf71iAQP)

[9/8/20 - Trimming and SNPs](https://hackmd.io/@NFpEogXySTuWExLvDQQHig/SJg1HVSNw)

[9/15/20 - Variant Calling in Julia ](https://hackmd.io/@NFpEogXySTuWExLvDQQHig/HkT3OdCND)

[9/17/20 -Visualization of VCF in Julia using Viva](https://hackmd.io/@NFpEogXySTuWExLvDQQHig/ryX9HfZBP)

[9/22/20 - GeneticVariants.jl](https://hackmd.io/@NFpEogXySTuWExLvDQQHig/BJtWoiDHD)

[9/29/20 - RNASeq in Salmon/R](https://hackmd.io/@NFpEogXySTuWExLvDQQHig/SkwWM4WHv)

[10/06/20 - RNASeq in Julia](https://hackmd.io/@NFpEogXySTuWExLvDQQHig/HyPHk7c8D)

[10/13/20](https://hackmd.io/@NFpEogXySTuWExLvDQQHig/r14UjLmvv)

[10/15/20](https://hackmd.io/@NFpEogXySTuWExLvDQQHig/B1WgpgUPw)

[10/20/20 - Pop Gen Day 1](https://hackmd.io/@NFpEogXySTuWExLvDQQHig/HyFpN93PD)

[10/27/20 - Fitness Landscapes](https://hackmd.io/@NFpEogXySTuWExLvDQQHig/H13yy0S_v)

[11/3/20 - Converting R to julia - pdClust example](https://hackmd.io/@NFpEogXySTuWExLvDQQHig/H1INdMJYD)