### Geno Ontology IDs #### NCBI Taxon ID Arabidopsis : 3702 Mouse : 10090 Human : 9606 #### Arabidopsis ``` wget ftp://ftp.ncbi.nih.gov/gene/DATA/GENE_INFO/Plants/Arabidopsis_thaliana.gene_info.gz ``` #### Mouse ``` wget ftp://ftp.ncbi.nih.gov/gene/DATA/GENE_INFO/Mammalia/Mus_musculus.gene_info.gz ``` #### Human ``` wget ftp://ftp.ncbi.nih.gov/gene/DATA/GENE_INFO/Mammalia/Homo_sapiens.gene_info.gz ``` #### NCBI Gene 2 Go ``` wget ftp://ftp.ncbi.nih.gov/gene/DATA/gene2go.gz ``` #### NCBI ID NM_# NP_# ```bash wget ftp://ftp.ncbi.nih.gov/gene/DATA/gene2refseq.gz ``` #### GOATOOLS fetch from GO ``` wget https://raw.githubusercontent.com/tanghaibao/goatools/master/scripts/fetch_associations.py ``` ### Go Visualization Gene_ontology_visualization http://kiharalab.org/web/navigo/inc/results.php?id=c688b16 http://wego.genomics.org.cn/ http://revigo.irb.hr/revigo.jsp http://www.tartaglialab.com/GO_analyser/tutorial http://metascape.org/gp/index.html#/main/step1 https://gist.github.com/saketkc/18d1a1f96a86d731ce53796955d0d9b7 #### interproscan https://github.com/ebi-pf-team/interproscan/wiki/HowToDownload