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# System prepended metadata

title: Example general conda env setups
tags: [General]

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---
tags: General
title: Example general conda env setups
---

# Example general conda env setups

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> The below uses `mamba` in place of `conda` for installs – it's worth it to pick this up if not familiar yet! See [here](https://astrobiomike.github.io/unix/conda-intro#bonus-mamba-no-5) for quick intro to `mamba`. 

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## Jupyter Lab conda environment creation (last updated 3-Oct-2022)

```bash
mamba create -n jupyterlab -c conda-forge jupyterlab python=3
```

Then can launch jupyter lab like so:

```bash
conda activate jupyterlab

jupyter lab
```

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## RStudio conda environment creation (last updated 3-Oct-2022)

```bash
mamba create -n rstudio -c conda-forge -c bioconda -c defaults r-base=4.1.3 rstudio=1.1.456 r-tidyverse=1.3.2
```

Then can launch rstudio like so:

```bash
conda activate rstudio

rstudio
```

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## Jupyter lab with R and unix kernels

```bash
mamba create -n jupyter-with-unix-and-r-kernels -c conda-forge -c bioconda -c defaults jupyterlab=3.6.0 \
             bash_kernel=0.9.0 r-irkernel=1.3.2 coreutils=9.1 r-base=4.1.3
```

Then can launch with:

```bash
jupyter lab
```

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