---
# System prepended metadata

title: CIA Group Meeting

---

# CIA Group Meeting

Group meeting schedule for the *Computational Image Analysis* Group at the CCTB.

## Mode

* __Thursday, 13:15__, every two weeks
* currently __online only__ via Zoom:
    * https://go.uniwue.de/cia-zoom
    * password: 157772
* alternating with __CIA journal club__ and __DLJC__
* __Topics:__
    1) update on general issues by Philip
    2) presentation by one group member (according to schedule)
    3) discussion, questions, short updates by others (voluntary)
* __Examples for what to present:__
    * give update about your project
    * could also show something that did not work
    * discuss problems, ask for help, review code
    * give intro about a method or topic
    * or talk about anything that might be of interest for the group

## Voting for paper presentation in CIA Journal Club

https://www.zotero.org/groups/4563609/cia-cctb-library/library

* Content-aware frame interpolation (CAFI): Deep Learning-based temporal super-resolution for fast bioimaging, Priessner et al.
* Precise measurement of nanoscopic septin ring structures in deep learning-assisted quantitative superresolution microscopy, Zehtabian et al. 
* Isotropic Reconstruction of Electron Tomograms with Deep Learning, Liu et al. 
* Graph Neural Network for Cell Tracking in Microscopy Videos, Ben-Haim et al.
* Common Limitations of Image Processing Metrics: A Picture Story, Reinke et al.:+1:


## Schedule

Please enter your topic yourself, and swap slots with someone else if you cannot make it. We can also invite external guests (suggestions welcome).


| Date     | Event         | Presenter  | Topic    |
| -------- | --------      | --------   | -------- |
| Jan 13   | Group Meeting | Philip     | First Meeting 2022|
| Jan 20   | *Journal Club*  | Philip   | DeepFlash2 http://arxiv.org/abs/2111.06693         |
| Jan 27   | Group Meeting | Diana      | TAC Test Talk  |
| Feb 3    | *DLJC*         | Philip  | AlphaFold2 https://www.nature.com/articles/s41586-021-03819-2
| Feb 10   | Group Meeting | Sebastian     | Compressed Sensing Networks |
| Feb 17   | *Journal Club*  | Felix      | Fourier Transformer https://arxiv.org/abs/2104.02555         |
| Feb 24   | Group Meeting |  -     |   -       |
| Mar 3    | *no meeting*         |  - |-
| Mar 10    | *DLJC*         | Markus Ankenbrand  |Prostate Cancer Discovery https://www.nature.com/articles/s41586-021-03922-4
| Mar 17   | Group Meeting | Chris     | Napari plugin development |
| Mar 24   | *Journal Club*  |  Diana          |  Networks for Point Cloud Handling http://arxiv.org/abs/2104.05706       |
| Mar 31   | Group Meeting |  Tristan     |  4D Cell Tracking        |
| Apr 7    | *DLJC*         | Chris  | Magnetic Control of Tokamak Plasmas https://www.nature.com/articles/s41586-021-04301-9
| Apr 14   | *no meeting* |   -   | -|
| Apr 21   | *no meeting*  |   -         | -         |
| Apr 28   | Group Meeting | Helmut | Unsupervised segmentation         |
| May 5    | *Journal Club*         | Sebastian  | Fast DNA-PAINT imaging using a deep neural network https://www.biorxiv.org/content/10.1101/2021.11.20.469366v1
| May 12   | Group Meeting | Felix |The Tru-worm show: Simulating the c. elegans forward locomotion network |
| May 19   | *DLJC*  |   Philip         |   Using deep learning to annotate the protein universe https://www.nature.com/articles/s41587-021-01179-w       |
| May 26   | *no meeting* |  -     |   -       |
| Jun 2    | *Journal Club*         | Chris  |Common Limitations of Image Processing Metrics https://arxiv.org/abs/2104.05642
| Jun 9   | Group Meeting |  Diana    | |
| Jun 16   | *no meeting*  | -           |  -        |
| Jun 23   | *no meeting* |   -    | -         |
| Jun 30    | *no meeting*         | -  | -
| Jul 7   | *DLJC*  |            |         |
| Jul 14    | Excursion         | Philip  | https://www.hochseilgarten-frankenturm.de/event-location
| Jul 21   | Group Meeting |  PhD student candidates     |  application presentations        |


